Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CPT1AP50416 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CPT1AP50416 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.26■□□□□ 0.51
CPT1AP50416 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPT1AP50416 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPT1AP50416 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.26■□□□□ 0.51
CPT1AP50416 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPT1AP50416 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.26■□□□□ 0.51
CPT1AP50416 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CPT1AP50416 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
CPT1AP50416 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.26■□□□□ 0.51
CPT1AP50416 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CPT1AP50416 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPT1AP50416 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CPT1AP50416 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CPT1AP50416 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CPT1AP50416 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CPT1AP50416 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.26■□□□□ 0.51
CPT1AP50416 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.26■□□□□ 0.51
CPT1AP50416 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CPT1AP50416 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CPT1AP50416 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.26■□□□□ 0.51
CPT1AP50416 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.26■□□□□ 0.51
CPT1AP50416 AC068880.1-201ENST00000507289 2297 ntBASIC18.26■□□□□ 0.51
CPT1AP50416 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPT1AP50416 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPT1AP50416 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CPT1AP50416 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPT1AP50416 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CPT1AP50416 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPT1AP50416 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPT1AP50416 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPT1AP50416 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
CPT1AP50416 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.26■□□□□ 0.51
CPT1AP50416 KRT8P12-202ENST00000472924 1397 ntBASIC18.26■□□□□ 0.51
CPT1AP50416 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
CPT1AP50416 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CPT1AP50416 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.26■□□□□ 0.51
CPT1AP50416 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
CPT1AP50416 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPT1AP50416 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.26■□□□□ 0.51
CPT1AP50416 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CPT1AP50416 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CPT1AP50416 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CPT1AP50416 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CPT1AP50416 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CPT1AP50416 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.25■□□□□ 0.51
CPT1AP50416 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.25■□□□□ 0.51
CPT1AP50416 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPT1AP50416 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CPT1AP50416 AL645728.1-201ENST00000366221 2101 ntBASIC18.25■□□□□ 0.51
CPT1AP50416 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
CPT1AP50416 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.25■□□□□ 0.51
CPT1AP50416 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
CPT1AP50416 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPT1AP50416 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CPT1AP50416 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPT1AP50416 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPT1AP50416 AL023806.1-201ENST00000603994 1649 ntBASIC18.25■□□□□ 0.51
CPT1AP50416 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPT1AP50416 SPDYE19P-201ENST00000338590 713 ntBASIC18.25■□□□□ 0.51
CPT1AP50416 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.25■□□□□ 0.51
CPT1AP50416 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.25■□□□□ 0.51
CPT1AP50416 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.25■□□□□ 0.51
CPT1AP50416 AC044860.1-202ENST00000559481 777 ntBASIC18.25■□□□□ 0.51
CPT1AP50416 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.25■□□□□ 0.51
CPT1AP50416 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
CPT1AP50416 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.25■□□□□ 0.51
CPT1AP50416 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPT1AP50416 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CPT1AP50416 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPT1AP50416 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.25■□□□□ 0.51
CPT1AP50416 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPT1AP50416 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPT1AP50416 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPT1AP50416 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPT1AP50416 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPT1AP50416 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CPT1AP50416 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CPT1AP50416 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPT1AP50416 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CPT1AP50416 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPT1AP50416 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
CPT1AP50416 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.24■□□□□ 0.51
CPT1AP50416 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPT1AP50416 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.24■□□□□ 0.51
CPT1AP50416 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CPT1AP50416 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.24■□□□□ 0.51
CPT1AP50416 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.24■□□□□ 0.51
CPT1AP50416 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPT1AP50416 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.24■□□□□ 0.51
CPT1AP50416 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.24■□□□□ 0.51
CPT1AP50416 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPT1AP50416 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPT1AP50416 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CPT1AP50416 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
CPT1AP50416 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPT1AP50416 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
CPT1AP50416 SPDYE17-201ENST00000412399 783 ntBASIC18.24■□□□□ 0.51
CPT1AP50416 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms