Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CASP4P49662 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CASP4P49662 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.1■□□□□ 0.49
CASP4P49662 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CASP4P49662 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CASP4P49662 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CASP4P49662 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.1■□□□□ 0.49
CASP4P49662 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CASP4P49662 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CASP4P49662 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CASP4P49662 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CASP4P49662 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CASP4P49662 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CASP4P49662 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.1■□□□□ 0.49
CASP4P49662 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CASP4P49662 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.1■□□□□ 0.49
CASP4P49662 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CASP4P49662 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.1■□□□□ 0.49
CASP4P49662 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CASP4P49662 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.1■□□□□ 0.49
CASP4P49662 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
CASP4P49662 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.1■□□□□ 0.49
CASP4P49662 PDPK2P-202ENST00000562415 1191 ntBASIC18.1■□□□□ 0.49
CASP4P49662 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
CASP4P49662 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.1■□□□□ 0.49
CASP4P49662 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.1■□□□□ 0.49
CASP4P49662 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.1■□□□□ 0.49
CASP4P49662 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CASP4P49662 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CASP4P49662 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
CASP4P49662 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
CASP4P49662 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.1■□□□□ 0.49
CASP4P49662 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.1■□□□□ 0.49
CASP4P49662 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CASP4P49662 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CASP4P49662 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.09■□□□□ 0.49
CASP4P49662 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CASP4P49662 CYP2T1P-202ENST00000641596 2535 ntBASIC18.09■□□□□ 0.49
CASP4P49662 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CASP4P49662 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CASP4P49662 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.09■□□□□ 0.49
CASP4P49662 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.09■□□□□ 0.49
CASP4P49662 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.09■□□□□ 0.49
CASP4P49662 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.09■□□□□ 0.49
CASP4P49662 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CASP4P49662 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.09■□□□□ 0.49
CASP4P49662 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.09■□□□□ 0.49
CASP4P49662 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.09■□□□□ 0.49
CASP4P49662 PMS2P4-201ENST00000412466 1052 ntBASIC18.09■□□□□ 0.49
CASP4P49662 AC140658.5-201ENST00000438532 169 ntBASIC18.09■□□□□ 0.49
CASP4P49662 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CASP4P49662 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CASP4P49662 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.09■□□□□ 0.49
CASP4P49662 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.09■□□□□ 0.49
CASP4P49662 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.09■□□□□ 0.49
CASP4P49662 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CASP4P49662 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.09■□□□□ 0.49
CASP4P49662 MIR3909-201ENST00000579518 119 ntBASIC18.09■□□□□ 0.49
CASP4P49662 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.09■□□□□ 0.49
CASP4P49662 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.09■□□□□ 0.49
CASP4P49662 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.09■□□□□ 0.49
CASP4P49662 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.09■□□□□ 0.49
CASP4P49662 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CASP4P49662 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.09■□□□□ 0.49
CASP4P49662 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CASP4P49662 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CASP4P49662 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CASP4P49662 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.09■□□□□ 0.49
CASP4P49662 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CASP4P49662 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CASP4P49662 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CASP4P49662 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CASP4P49662 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.09■□□□□ 0.49
CASP4P49662 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CASP4P49662 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CASP4P49662 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CASP4P49662 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CASP4P49662 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CASP4P49662 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CASP4P49662 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.08■□□□□ 0.49
CASP4P49662 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CASP4P49662 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CASP4P49662 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CASP4P49662 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CASP4P49662 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CASP4P49662 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CASP4P49662 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CASP4P49662 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.08■□□□□ 0.48
CASP4P49662 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.08■□□□□ 0.48
CASP4P49662 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.08■□□□□ 0.48
CASP4P49662 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.08■□□□□ 0.48
CASP4P49662 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.08■□□□□ 0.48
CASP4P49662 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.08■□□□□ 0.48
CASP4P49662 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.08■□□□□ 0.48
CASP4P49662 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CASP4P49662 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CASP4P49662 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.08■□□□□ 0.48
CASP4P49662 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.08■□□□□ 0.48
CASP4P49662 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.08■□□□□ 0.48
CASP4P49662 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms