Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC13.2□□□□□ -0.3
CDC34P49427 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.2□□□□□ -0.3
CDC34P49427 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDC34P49427 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDC34P49427 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDC34P49427 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC34P49427 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDC34P49427 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDC34P49427 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC34P49427 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC34P49427 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CDC34P49427 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC34P49427 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC34P49427 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDC34P49427 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CDC34P49427 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDC34P49427 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC34P49427 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC34P49427 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
CDC34P49427 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.19□□□□□ -0.3
CDC34P49427 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CDC34P49427 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CDC34P49427 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.19□□□□□ -0.3
CDC34P49427 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDC34P49427 GGT3P-204ENST00000453783 1664 ntBASIC13.19□□□□□ -0.3
CDC34P49427 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDC34P49427 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDC34P49427 CYP2D8P-201ENST00000433633 1490 ntBASIC13.19□□□□□ -0.3
CDC34P49427 AL353593.2-201ENST00000602529 1483 ntBASIC13.19□□□□□ -0.3
CDC34P49427 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDC34P49427 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.19□□□□□ -0.3
CDC34P49427 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDC34P49427 AC003669.1-201ENST00000334569 611 ntBASIC13.19□□□□□ -0.3
CDC34P49427 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDC34P49427 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDC34P49427 TSPY7P-201ENST00000431358 1114 ntBASIC13.19□□□□□ -0.3
CDC34P49427 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC13.19□□□□□ -0.3
CDC34P49427 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDC34P49427 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CDC34P49427 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.19□□□□□ -0.3
CDC34P49427 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC13.19□□□□□ -0.3
CDC34P49427 AC010947.1-201ENST00000623454 693 ntBASIC13.19□□□□□ -0.3
CDC34P49427 AL139011.1-202ENST00000642063 584 ntBASIC13.19□□□□□ -0.3
CDC34P49427 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDC34P49427 MYO15B-237ENST00000642007 4893 ntBASIC13.19□□□□□ -0.3
CDC34P49427 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.19□□□□□ -0.3
CDC34P49427 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CDC34P49427 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.19□□□□□ -0.3
CDC34P49427 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDC34P49427 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDC34P49427 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDC34P49427 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDC34P49427 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDC34P49427 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDC34P49427 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.19□□□□□ -0.3
CDC34P49427 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.19□□□□□ -0.3
CDC34P49427 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.19□□□□□ -0.3
CDC34P49427 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDC34P49427 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDC34P49427 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.19□□□□□ -0.3
CDC34P49427 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.19□□□□□ -0.3
CDC34P49427 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.19□□□□□ -0.3
CDC34P49427 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDC34P49427 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.19□□□□□ -0.3
CDC34P49427 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CDC34P49427 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDC34P49427 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CDC34P49427 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CDC34P49427 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.18□□□□□ -0.3
CDC34P49427 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.18□□□□□ -0.3
CDC34P49427 AC006058.4-201ENST00000624016 1670 ntBASIC13.18□□□□□ -0.3
CDC34P49427 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC13.18□□□□□ -0.3
CDC34P49427 MME-217ENST00000616757 1315 ntTSL 5 BASIC13.18□□□□□ -0.3
CDC34P49427 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CDC34P49427 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CDC34P49427 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDC34P49427 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.18□□□□□ -0.3
CDC34P49427 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDC34P49427 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.18□□□□□ -0.3
CDC34P49427 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDC34P49427 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDC34P49427 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDC34P49427 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CDC34P49427 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDC34P49427 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDC34P49427 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC13.18□□□□□ -0.3
CDC34P49427 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC13.18□□□□□ -0.3
CDC34P49427 FAM220CP-201ENST00000395253 831 ntBASIC13.18□□□□□ -0.3
CDC34P49427 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC13.18□□□□□ -0.3
CDC34P49427 KLF4P1-201ENST00000412782 1185 ntBASIC13.18□□□□□ -0.3
CDC34P49427 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC13.18□□□□□ -0.3
CDC34P49427 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDC34P49427 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
CDC34P49427 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC13.18□□□□□ -0.3
CDC34P49427 AL023973.1-201ENST00000624619 620 ntBASIC13.18□□□□□ -0.3
CDC34P49427 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDC34P49427 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CDC34P49427 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC13.18□□□□□ -0.3
CDC34P49427 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDC34P49427 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms