Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LHX1P48742 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LHX1P48742 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LHX1P48742 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LHX1P48742 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
LHX1P48742 GGT3P-204ENST00000453783 1664 ntBASIC17.54■□□□□ 0.4
LHX1P48742 PCGF3-213ENST00000620529 1899 ntBASIC17.54■□□□□ 0.4
LHX1P48742 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LHX1P48742 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LHX1P48742 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LHX1P48742 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LHX1P48742 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LHX1P48742 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LHX1P48742 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LHX1P48742 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.54■□□□□ 0.4
LHX1P48742 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LHX1P48742 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LHX1P48742 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LHX1P48742 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LHX1P48742 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LHX1P48742 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LHX1P48742 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
LHX1P48742 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LHX1P48742 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LHX1P48742 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LHX1P48742 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LHX1P48742 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
LHX1P48742 CNN2P2-201ENST00000443536 909 ntBASIC17.53■□□□□ 0.4
LHX1P48742 AC093724.1-201ENST00000448659 1027 ntBASIC17.53■□□□□ 0.4
LHX1P48742 CNN2P3-201ENST00000450201 906 ntBASIC17.53■□□□□ 0.4
LHX1P48742 AC067863.1-201ENST00000494933 530 ntBASIC17.53■□□□□ 0.4
LHX1P48742 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
LHX1P48742 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.53■□□□□ 0.4
LHX1P48742 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.53■□□□□ 0.4
LHX1P48742 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.53■□□□□ 0.4
LHX1P48742 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.53■□□□□ 0.4
LHX1P48742 AL136317.3-201ENST00000618497 906 ntBASIC17.53■□□□□ 0.4
LHX1P48742 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LHX1P48742 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LHX1P48742 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LHX1P48742 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LHX1P48742 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LHX1P48742 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LHX1P48742 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LHX1P48742 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LHX1P48742 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LHX1P48742 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LHX1P48742 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LHX1P48742 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LHX1P48742 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.52■□□□□ 0.4
LHX1P48742 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.52■□□□□ 0.4
LHX1P48742 FOXO1B-201ENST00000504678 1527 ntBASIC17.52■□□□□ 0.4
LHX1P48742 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
LHX1P48742 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LHX1P48742 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LHX1P48742 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LHX1P48742 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
LHX1P48742 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LHX1P48742 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
LHX1P48742 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LHX1P48742 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LHX1P48742 FAM86GP-201ENST00000448322 971 ntBASIC17.52■□□□□ 0.4
LHX1P48742 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.52■□□□□ 0.4
LHX1P48742 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.52■□□□□ 0.4
LHX1P48742 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
LHX1P48742 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.52■□□□□ 0.4
LHX1P48742 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.52■□□□□ 0.4
LHX1P48742 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.52■□□□□ 0.4
LHX1P48742 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LHX1P48742 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.52■□□□□ 0.4
LHX1P48742 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.52■□□□□ 0.4
LHX1P48742 Z92544.3-201ENST00000624747 417 ntBASIC17.52■□□□□ 0.4
LHX1P48742 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.52■□□□□ 0.4
LHX1P48742 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LHX1P48742 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.52■□□□□ 0.4
LHX1P48742 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LHX1P48742 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
LHX1P48742 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
LHX1P48742 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LHX1P48742 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LHX1P48742 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LHX1P48742 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LHX1P48742 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.52■□□□□ 0.39
LHX1P48742 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
LHX1P48742 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LHX1P48742 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LHX1P48742 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LHX1P48742 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LHX1P48742 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
LHX1P48742 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
LHX1P48742 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LHX1P48742 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.51■□□□□ 0.39
LHX1P48742 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.51■□□□□ 0.39
LHX1P48742 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LHX1P48742 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LHX1P48742 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.51■□□□□ 0.39
LHX1P48742 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LHX1P48742 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
LHX1P48742 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.51■□□□□ 0.39
LHX1P48742 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms