Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SLC1A1P43005 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A1P43005 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A1P43005 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
SLC1A1P43005 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A1P43005 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A1P43005 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A1P43005 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SLC1A1P43005 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SLC1A1P43005 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC1A1P43005 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A1P43005 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SLC1A1P43005 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A1P43005 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC1A1P43005 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A1P43005 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A1P43005 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC1A1P43005 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SLC1A1P43005 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A1P43005 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
SLC1A1P43005 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SLC1A1P43005 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SLC1A1P43005 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC1A1P43005 HNRNPDP1-201ENST00000439535 754 ntBASIC17.4■□□□□ 0.38
SLC1A1P43005 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SLC1A1P43005 KRT18P56-201ENST00000507275 550 ntBASIC17.4■□□□□ 0.38
SLC1A1P43005 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SLC1A1P43005 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC1A1P43005 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SLC1A1P43005 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.4■□□□□ 0.38
SLC1A1P43005 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A1P43005 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A1P43005 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SLC1A1P43005 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SLC1A1P43005 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC1A1P43005 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SLC1A1P43005 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SLC1A1P43005 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC1A1P43005 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC1A1P43005 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SLC1A1P43005 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A1P43005 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.4■□□□□ 0.38
SLC1A1P43005 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A1P43005 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SLC1A1P43005 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
SLC1A1P43005 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SLC1A1P43005 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SLC1A1P43005 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.39■□□□□ 0.38
SLC1A1P43005 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SLC1A1P43005 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
SLC1A1P43005 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A1P43005 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SLC1A1P43005 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC1A1P43005 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A1P43005 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A1P43005 KRT18P67-201ENST00000432816 1264 ntBASIC17.39■□□□□ 0.37
SLC1A1P43005 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A1P43005 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.39■□□□□ 0.37
SLC1A1P43005 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.39■□□□□ 0.37
SLC1A1P43005 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC1A1P43005 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC1A1P43005 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A1P43005 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A1P43005 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A1P43005 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.39■□□□□ 0.37
SLC1A1P43005 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A1P43005 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A1P43005 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A1P43005 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
SLC1A1P43005 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A1P43005 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC1A1P43005 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A1P43005 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A1P43005 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A1P43005 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A1P43005 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A1P43005 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A1P43005 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SLC1A1P43005 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A1P43005 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A1P43005 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A1P43005 AL603832.2-201ENST00000566195 2125 ntBASIC17.38■□□□□ 0.37
SLC1A1P43005 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A1P43005 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC1A1P43005 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A1P43005 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A1P43005 REXO1L8P-201ENST00000604378 1897 ntBASIC17.38■□□□□ 0.37
SLC1A1P43005 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A1P43005 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A1P43005 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A1P43005 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A1P43005 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A1P43005 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SLC1A1P43005 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.38■□□□□ 0.37
SLC1A1P43005 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A1P43005 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.38■□□□□ 0.37
SLC1A1P43005 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.38■□□□□ 0.37
SLC1A1P43005 FAM185BP-201ENST00000443595 716 ntBASIC17.38■□□□□ 0.37
SLC1A1P43005 EMBP1-201ENST00000458200 901 ntBASIC17.38■□□□□ 0.37
SLC1A1P43005 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms