Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDKN2CP42773 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDKN2CP42773 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDKN2CP42773 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDKN2CP42773 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.74■□□□□ 0.11
CDKN2CP42773 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CDKN2CP42773 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.74■□□□□ 0.11
CDKN2CP42773 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDKN2CP42773 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDKN2CP42773 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.74■□□□□ 0.11
CDKN2CP42773 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.74■□□□□ 0.11
CDKN2CP42773 AC091304.2-201ENST00000564639 760 ntBASIC15.74■□□□□ 0.11
CDKN2CP42773 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.74■□□□□ 0.11
CDKN2CP42773 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.74■□□□□ 0.11
CDKN2CP42773 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.74■□□□□ 0.11
CDKN2CP42773 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.74■□□□□ 0.11
CDKN2CP42773 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDKN2CP42773 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDKN2CP42773 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.74■□□□□ 0.11
CDKN2CP42773 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.74■□□□□ 0.11
CDKN2CP42773 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.74■□□□□ 0.11
CDKN2CP42773 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CDKN2CP42773 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CDKN2CP42773 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDKN2CP42773 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDKN2CP42773 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.74■□□□□ 0.11
CDKN2CP42773 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDKN2CP42773 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDKN2CP42773 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDKN2CP42773 PCGF3-213ENST00000620529 1899 ntBASIC15.74■□□□□ 0.11
CDKN2CP42773 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2CP42773 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.73■□□□□ 0.11
CDKN2CP42773 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CDKN2CP42773 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CDKN2CP42773 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CDKN2CP42773 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2CP42773 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
CDKN2CP42773 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2CP42773 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.73■□□□□ 0.11
CDKN2CP42773 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.73■□□□□ 0.11
CDKN2CP42773 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2CP42773 AF238378.1-201ENST00000526806 358 ntBASIC15.73■□□□□ 0.11
CDKN2CP42773 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.73■□□□□ 0.11
CDKN2CP42773 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.73■□□□□ 0.11
CDKN2CP42773 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2CP42773 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.73■□□□□ 0.11
CDKN2CP42773 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CDKN2CP42773 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.73■□□□□ 0.11
CDKN2CP42773 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2CP42773 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2CP42773 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2CP42773 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2CP42773 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2CP42773 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2CP42773 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.73■□□□□ 0.11
CDKN2CP42773 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2CP42773 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2CP42773 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2CP42773 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.73■□□□□ 0.11
CDKN2CP42773 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.73■□□□□ 0.11
CDKN2CP42773 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2CP42773 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2CP42773 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2CP42773 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDKN2CP42773 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDKN2CP42773 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDKN2CP42773 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.72■□□□□ 0.11
CDKN2CP42773 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDKN2CP42773 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.72■□□□□ 0.11
CDKN2CP42773 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.72■□□□□ 0.11
CDKN2CP42773 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CDKN2CP42773 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDKN2CP42773 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
CDKN2CP42773 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.72■□□□□ 0.11
CDKN2CP42773 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.72■□□□□ 0.11
CDKN2CP42773 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDKN2CP42773 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.72■□□□□ 0.11
CDKN2CP42773 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CDKN2CP42773 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDKN2CP42773 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CDKN2CP42773 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDKN2CP42773 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.72■□□□□ 0.11
CDKN2CP42773 MIR1224-201ENST00000408193 85 ntBASIC15.72■□□□□ 0.11
CDKN2CP42773 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.72■□□□□ 0.11
CDKN2CP42773 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.72■□□□□ 0.11
CDKN2CP42773 SCARNA2-201ENST00000458748 420 ntBASIC15.72■□□□□ 0.11
CDKN2CP42773 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.72■□□□□ 0.11
CDKN2CP42773 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.72■□□□□ 0.11
CDKN2CP42773 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.72■□□□□ 0.11
CDKN2CP42773 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.72■□□□□ 0.11
CDKN2CP42773 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDKN2CP42773 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
CDKN2CP42773 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.72■□□□□ 0.11
CDKN2CP42773 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDKN2CP42773 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDKN2CP42773 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDKN2CP42773 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.72■□□□□ 0.11
CDKN2CP42773 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.72■□□□□ 0.11
CDKN2CP42773 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.72■□□□□ 0.11
CDKN2CP42773 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms