Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HADHAP40939 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HADHAP40939 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.84■□□□□ 0.29
HADHAP40939 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HADHAP40939 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HADHAP40939 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HADHAP40939 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HADHAP40939 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HADHAP40939 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HADHAP40939 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
HADHAP40939 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HADHAP40939 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HADHAP40939 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HADHAP40939 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HADHAP40939 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HADHAP40939 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HADHAP40939 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
HADHAP40939 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.83■□□□□ 0.28
HADHAP40939 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.83■□□□□ 0.28
HADHAP40939 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.83■□□□□ 0.28
HADHAP40939 AC079776.4-201ENST00000511039 504 ntBASIC16.83■□□□□ 0.28
HADHAP40939 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.83■□□□□ 0.28
HADHAP40939 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.83■□□□□ 0.28
HADHAP40939 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.83■□□□□ 0.28
HADHAP40939 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HADHAP40939 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.83■□□□□ 0.28
HADHAP40939 OR7E47P-204ENST00000575924 449 ntBASIC16.83■□□□□ 0.28
HADHAP40939 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HADHAP40939 MIR4492-201ENST00000581627 80 ntBASIC16.83■□□□□ 0.28
HADHAP40939 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HADHAP40939 Z83851.2-201ENST00000609564 659 ntBASIC16.83■□□□□ 0.28
HADHAP40939 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.83■□□□□ 0.28
HADHAP40939 AC008894.3-201ENST00000624324 3103 ntBASIC16.83■□□□□ 0.28
HADHAP40939 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
HADHAP40939 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
HADHAP40939 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HADHAP40939 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.82■□□□□ 0.28
HADHAP40939 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HADHAP40939 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HADHAP40939 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HADHAP40939 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.82■□□□□ 0.28
HADHAP40939 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.82■□□□□ 0.28
HADHAP40939 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HADHAP40939 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HADHAP40939 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HADHAP40939 AC022188.1-201ENST00000620960 1664 ntBASIC16.82■□□□□ 0.28
HADHAP40939 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HADHAP40939 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.82■□□□□ 0.28
HADHAP40939 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HADHAP40939 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.82■□□□□ 0.28
HADHAP40939 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HADHAP40939 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HADHAP40939 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HADHAP40939 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
HADHAP40939 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HADHAP40939 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HADHAP40939 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HADHAP40939 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.82■□□□□ 0.28
HADHAP40939 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.82■□□□□ 0.28
HADHAP40939 VN2R19P-201ENST00000442399 1052 ntBASIC16.82■□□□□ 0.28
HADHAP40939 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.82■□□□□ 0.28
HADHAP40939 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.82■□□□□ 0.28
HADHAP40939 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.82■□□□□ 0.28
HADHAP40939 AC087641.1-201ENST00000557561 1021 ntBASIC16.82■□□□□ 0.28
HADHAP40939 AC145285.3-201ENST00000564603 959 ntBASIC16.82■□□□□ 0.28
HADHAP40939 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.82■□□□□ 0.28
HADHAP40939 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.82■□□□□ 0.28
HADHAP40939 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HADHAP40939 BX640515.1-201ENST00000617215 977 ntBASIC16.82■□□□□ 0.28
HADHAP40939 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.82■□□□□ 0.28
HADHAP40939 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HADHAP40939 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HADHAP40939 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
HADHAP40939 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
HADHAP40939 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HADHAP40939 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.82■□□□□ 0.28
HADHAP40939 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
HADHAP40939 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HADHAP40939 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HADHAP40939 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HADHAP40939 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HADHAP40939 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HADHAP40939 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
HADHAP40939 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HADHAP40939 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.82■□□□□ 0.28
HADHAP40939 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HADHAP40939 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HADHAP40939 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HADHAP40939 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HADHAP40939 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
HADHAP40939 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HADHAP40939 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.81■□□□□ 0.28
HADHAP40939 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HADHAP40939 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.81■□□□□ 0.28
HADHAP40939 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HADHAP40939 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HADHAP40939 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HADHAP40939 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HADHAP40939 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.81■□□□□ 0.28
HADHAP40939 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms