Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP24386 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP24386 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.6■□□□□ 0.09
CHMP24386 ELK2BP-201ENST00000415014 1224 ntBASIC15.6■□□□□ 0.09
CHMP24386 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP24386 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.6■□□□□ 0.09
CHMP24386 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.6■□□□□ 0.09
CHMP24386 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP24386 AC006504.4-201ENST00000592118 1568 ntBASIC15.6■□□□□ 0.09
CHMP24386 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP24386 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CHMP24386 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP24386 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
CHMP24386 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.6■□□□□ 0.09
CHMP24386 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP24386 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.6■□□□□ 0.09
CHMP24386 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.6■□□□□ 0.09
CHMP24386 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP24386 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP24386 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP24386 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.6■□□□□ 0.09
CHMP24386 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP24386 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP24386 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.59■□□□□ 0.09
CHMP24386 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.59■□□□□ 0.09
CHMP24386 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP24386 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP24386 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CHMP24386 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP24386 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.59■□□□□ 0.09
CHMP24386 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP24386 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP24386 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CHMP24386 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.59■□□□□ 0.09
CHMP24386 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.59■□□□□ 0.09
CHMP24386 RNA5SP415-201ENST00000517246 115 ntBASIC15.59■□□□□ 0.09
CHMP24386 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.59■□□□□ 0.09
CHMP24386 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP24386 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.59■□□□□ 0.09
CHMP24386 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.59■□□□□ 0.09
CHMP24386 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.59■□□□□ 0.09
CHMP24386 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.59■□□□□ 0.09
CHMP24386 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.59■□□□□ 0.09
CHMP24386 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP24386 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.59■□□□□ 0.09
CHMP24386 AL805961.1-202ENST00000641562 540 ntBASIC15.59■□□□□ 0.09
CHMP24386 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CHMP24386 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.59■□□□□ 0.09
CHMP24386 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP24386 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP24386 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.59■□□□□ 0.09
CHMP24386 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP24386 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.59■□□□□ 0.09
CHMP24386 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP24386 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.59■□□□□ 0.09
CHMP24386 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP24386 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP24386 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP24386 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP24386 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CHMP24386 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CHMP24386 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.59■□□□□ 0.09
CHMP24386 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CHMP24386 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CHMP24386 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
CHMP24386 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CHMP24386 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CHMP24386 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CHMP24386 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CHMP24386 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CHMP24386 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CHMP24386 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CHMP24386 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.58■□□□□ 0.08
CHMP24386 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
CHMP24386 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.58■□□□□ 0.08
CHMP24386 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP24386 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP24386 AP002414.1-201ENST00000391405 1147 ntBASIC15.58■□□□□ 0.08
CHMP24386 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.58■□□□□ 0.08
CHMP24386 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CHMP24386 UNC93B6-202ENST00000528242 690 ntBASIC15.58■□□□□ 0.08
CHMP24386 Z83851.2-201ENST00000609564 659 ntBASIC15.58■□□□□ 0.08
CHMP24386 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CHMP24386 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.58■□□□□ 0.08
CHMP24386 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP24386 TUBB8P12-201ENST00000308911 1335 ntBASIC15.58■□□□□ 0.08
CHMP24386 TUBB7P-202ENST00000428444 1305 ntBASIC15.58■□□□□ 0.08
CHMP24386 TUBB8P7-204ENST00000567960 1332 ntBASIC15.58■□□□□ 0.08
CHMP24386 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP24386 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
CHMP24386 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.58■□□□□ 0.08
CHMP24386 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP24386 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CHMP24386 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CHMP24386 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP24386 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP24386 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP24386 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CHMP24386 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP24386 PAUPAR-201ENST00000630360 2965 ntBASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms