Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.81□□□□□ -0.36
RAB4AP20338 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC12.81□□□□□ -0.36
RAB4AP20338 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.81□□□□□ -0.36
RAB4AP20338 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB4AP20338 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
RAB4AP20338 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB4AP20338 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
RAB4AP20338 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB4AP20338 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
RAB4AP20338 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
RAB4AP20338 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
RAB4AP20338 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB4AP20338 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC12.8□□□□□ -0.36
RAB4AP20338 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB4AP20338 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB4AP20338 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB4AP20338 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB4AP20338 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC12.8□□□□□ -0.36
RAB4AP20338 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
RAB4AP20338 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
RAB4AP20338 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB4AP20338 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC12.8□□□□□ -0.36
RAB4AP20338 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
RAB4AP20338 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC12.8□□□□□ -0.36
RAB4AP20338 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB4AP20338 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB4AP20338 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB4AP20338 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC12.8□□□□□ -0.36
RAB4AP20338 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB4AP20338 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC12.8□□□□□ -0.36
RAB4AP20338 WWOX-216ENST00000569818 525 ntBASIC12.8□□□□□ -0.36
RAB4AP20338 DGCR10-201ENST00000609839 495 ntBASIC12.8□□□□□ -0.36
RAB4AP20338 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB4AP20338 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
RAB4AP20338 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAB4AP20338 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB4AP20338 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB4AP20338 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAB4AP20338 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC12.8□□□□□ -0.36
RAB4AP20338 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
RAB4AP20338 AC046185.3-201ENST00000623228 1824 ntBASIC12.8□□□□□ -0.36
RAB4AP20338 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
RAB4AP20338 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAB4AP20338 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC12.8□□□□□ -0.36
RAB4AP20338 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB4AP20338 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
RAB4AP20338 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB4AP20338 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.8□□□□□ -0.36
RAB4AP20338 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB4AP20338 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB4AP20338 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC12.8□□□□□ -0.36
RAB4AP20338 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAB4AP20338 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
RAB4AP20338 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB4AP20338 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.8□□□□□ -0.36
RAB4AP20338 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB4AP20338 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC12.79□□□□□ -0.36
RAB4AP20338 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC12.79□□□□□ -0.36
RAB4AP20338 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC12.79□□□□□ -0.36
RAB4AP20338 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.79□□□□□ -0.36
RAB4AP20338 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB4AP20338 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB4AP20338 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
RAB4AP20338 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB4AP20338 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB4AP20338 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
RAB4AP20338 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
RAB4AP20338 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
RAB4AP20338 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
RAB4AP20338 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RAB4AP20338 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB4AP20338 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RAB4AP20338 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
RAB4AP20338 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RAB4AP20338 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB4AP20338 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RAB4AP20338 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC12.79□□□□□ -0.36
RAB4AP20338 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12.79□□□□□ -0.36
RAB4AP20338 AC013268.4-201ENST00000637413 2228 ntBASIC12.79□□□□□ -0.36
RAB4AP20338 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
RAB4AP20338 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RAB4AP20338 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RAB4AP20338 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC12.79□□□□□ -0.36
RAB4AP20338 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC12.79□□□□□ -0.36
RAB4AP20338 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC12.79□□□□□ -0.36
RAB4AP20338 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RAB4AP20338 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
RAB4AP20338 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
RAB4AP20338 CR769767.2-201ENST00000622735 460 ntBASIC12.79□□□□□ -0.36
RAB4AP20338 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
RAB4AP20338 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB4AP20338 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
RAB4AP20338 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RAB4AP20338 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms