Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
NCK1P16333 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.76■□□□□ 0.11
NCK1P16333 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.76■□□□□ 0.11
NCK1P16333 NTF6B-201ENST00000591913 560 ntBASIC15.76■□□□□ 0.11
NCK1P16333 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.76■□□□□ 0.11
NCK1P16333 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
NCK1P16333 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.76■□□□□ 0.11
NCK1P16333 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCK1P16333 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NCK1P16333 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.76■□□□□ 0.11
NCK1P16333 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.76■□□□□ 0.11
NCK1P16333 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.76■□□□□ 0.11
NCK1P16333 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.76■□□□□ 0.11
NCK1P16333 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
NCK1P16333 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCK1P16333 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCK1P16333 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.76■□□□□ 0.11
NCK1P16333 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NCK1P16333 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCK1P16333 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCK1P16333 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCK1P16333 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCK1P16333 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCK1P16333 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCK1P16333 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NCK1P16333 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCK1P16333 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCK1P16333 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.75■□□□□ 0.11
NCK1P16333 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.75■□□□□ 0.11
NCK1P16333 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCK1P16333 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NCK1P16333 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NCK1P16333 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.75■□□□□ 0.11
NCK1P16333 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCK1P16333 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
NCK1P16333 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCK1P16333 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCK1P16333 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCK1P16333 AP005117.1-202ENST00000581724 1908 ntBASIC15.75■□□□□ 0.11
NCK1P16333 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCK1P16333 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.75■□□□□ 0.11
NCK1P16333 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NCK1P16333 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCK1P16333 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.75■□□□□ 0.11
NCK1P16333 RCN1P2-201ENST00000398357 915 ntBASIC15.75■□□□□ 0.11
NCK1P16333 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCK1P16333 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.75■□□□□ 0.11
NCK1P16333 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.75■□□□□ 0.11
NCK1P16333 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.75■□□□□ 0.11
NCK1P16333 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
NCK1P16333 AC022616.7-201ENST00000525383 220 ntBASIC15.75■□□□□ 0.11
NCK1P16333 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.75■□□□□ 0.11
NCK1P16333 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.75■□□□□ 0.11
NCK1P16333 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.75■□□□□ 0.11
NCK1P16333 TERC-201ENST00000602385 541 ntBASIC15.75■□□□□ 0.11
NCK1P16333 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NCK1P16333 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.75■□□□□ 0.11
NCK1P16333 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCK1P16333 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCK1P16333 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCK1P16333 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.75■□□□□ 0.11
NCK1P16333 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NCK1P16333 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCK1P16333 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NCK1P16333 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.75■□□□□ 0.11
NCK1P16333 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCK1P16333 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NCK1P16333 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.75■□□□□ 0.11
NCK1P16333 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
NCK1P16333 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NCK1P16333 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCK1P16333 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NCK1P16333 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCK1P16333 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCK1P16333 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCK1P16333 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.74■□□□□ 0.11
NCK1P16333 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCK1P16333 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.74■□□□□ 0.11
NCK1P16333 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCK1P16333 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NCK1P16333 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCK1P16333 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NCK1P16333 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.74■□□□□ 0.11
NCK1P16333 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCK1P16333 AC013268.4-201ENST00000637413 2228 ntBASIC15.74■□□□□ 0.11
NCK1P16333 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
NCK1P16333 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCK1P16333 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCK1P16333 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NCK1P16333 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.74■□□□□ 0.11
NCK1P16333 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.74■□□□□ 0.11
NCK1P16333 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NCK1P16333 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
NCK1P16333 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.74■□□□□ 0.11
NCK1P16333 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.74■□□□□ 0.11
NCK1P16333 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
NCK1P16333 AP000867.4-201ENST00000641616 219 ntBASIC15.74■□□□□ 0.11
NCK1P16333 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCK1P16333 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.74■□□□□ 0.11
NCK1P16333 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms