Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.51■□□□□ 0.71
TOP1P11387 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.51■□□□□ 0.71
TOP1P11387 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.51■□□□□ 0.71
TOP1P11387 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.51■□□□□ 0.71
TOP1P11387 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.51■□□□□ 0.71
TOP1P11387 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TOP1P11387 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.51■□□□□ 0.71
TOP1P11387 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.51■□□□□ 0.71
TOP1P11387 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TOP1P11387 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.51■□□□□ 0.71
TOP1P11387 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TOP1P11387 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TOP1P11387 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TOP1P11387 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TOP1P11387 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TOP1P11387 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TOP1P11387 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TOP1P11387 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TOP1P11387 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TOP1P11387 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TOP1P11387 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TOP1P11387 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TOP1P11387 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TOP1P11387 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.51■□□□□ 0.71
TOP1P11387 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TOP1P11387 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TOP1P11387 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TOP1P11387 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TOP1P11387 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TOP1P11387 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TOP1P11387 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
TOP1P11387 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.5■□□□□ 0.71
TOP1P11387 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TOP1P11387 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TOP1P11387 AC016027.1-202ENST00000607927 1699 ntBASIC19.5■□□□□ 0.71
TOP1P11387 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TOP1P11387 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.5■□□□□ 0.71
TOP1P11387 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.5■□□□□ 0.71
TOP1P11387 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TOP1P11387 AC018695.7-201ENST00000624587 2492 ntBASIC19.5■□□□□ 0.71
TOP1P11387 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.5■□□□□ 0.71
TOP1P11387 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.5■□□□□ 0.71
TOP1P11387 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TOP1P11387 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.5■□□□□ 0.71
TOP1P11387 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TOP1P11387 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TOP1P11387 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
TOP1P11387 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TOP1P11387 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
TOP1P11387 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TOP1P11387 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TOP1P11387 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TOP1P11387 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TOP1P11387 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.49■□□□□ 0.71
TOP1P11387 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TOP1P11387 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TOP1P11387 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TOP1P11387 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TOP1P11387 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TOP1P11387 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TOP1P11387 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TOP1P11387 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.49■□□□□ 0.71
TOP1P11387 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TOP1P11387 AL592309.1-201ENST00000443127 649 ntBASIC19.49■□□□□ 0.71
TOP1P11387 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.49■□□□□ 0.71
TOP1P11387 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.49■□□□□ 0.71
TOP1P11387 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TOP1P11387 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
TOP1P11387 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TOP1P11387 AC005915.1-201ENST00000624912 2018 ntBASIC19.49■□□□□ 0.71
TOP1P11387 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.49■□□□□ 0.71
TOP1P11387 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
TOP1P11387 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
TOP1P11387 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TOP1P11387 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TOP1P11387 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TOP1P11387 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.48■□□□□ 0.71
TOP1P11387 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.48■□□□□ 0.71
TOP1P11387 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TOP1P11387 AC105020.1-201ENST00000435356 2205 ntBASIC19.48■□□□□ 0.71
TOP1P11387 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TOP1P11387 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.48■□□□□ 0.71
TOP1P11387 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TOP1P11387 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TOP1P11387 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TOP1P11387 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TOP1P11387 AGGF1P2-201ENST00000426656 2106 ntBASIC19.48■□□□□ 0.71
TOP1P11387 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TOP1P11387 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TOP1P11387 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TOP1P11387 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.48■□□□□ 0.71
TOP1P11387 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.48■□□□□ 0.71
TOP1P11387 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TOP1P11387 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TOP1P11387 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TOP1P11387 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.48■□□□□ 0.71
TOP1P11387 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TOP1P11387 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.48■□□□□ 0.71
TOP1P11387 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TOP1P11387 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms