Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD28P10747 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD28P10747 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CD28P10747 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC12.99□□□□□ -0.33
CD28P10747 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC12.99□□□□□ -0.33
CD28P10747 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CD28P10747 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD28P10747 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CD28P10747 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD28P10747 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC12.99□□□□□ -0.33
CD28P10747 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD28P10747 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC12.99□□□□□ -0.33
CD28P10747 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD28P10747 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD28P10747 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD28P10747 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CD28P10747 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CD28P10747 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CD28P10747 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC12.99□□□□□ -0.33
CD28P10747 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.99□□□□□ -0.33
CD28P10747 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD28P10747 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC12.99□□□□□ -0.33
CD28P10747 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.99□□□□□ -0.33
CD28P10747 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CD28P10747 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.99□□□□□ -0.33
CD28P10747 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC12.99□□□□□ -0.33
CD28P10747 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.99□□□□□ -0.33
CD28P10747 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC12.99□□□□□ -0.33
CD28P10747 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CD28P10747 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC12.99□□□□□ -0.33
CD28P10747 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC12.99□□□□□ -0.33
CD28P10747 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.99□□□□□ -0.33
CD28P10747 AL138918.1-201ENST00000568306 659 ntBASIC12.99□□□□□ -0.33
CD28P10747 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CD28P10747 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD28P10747 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC12.99□□□□□ -0.33
CD28P10747 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC12.99□□□□□ -0.33
CD28P10747 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC12.99□□□□□ -0.33
CD28P10747 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.99□□□□□ -0.33
CD28P10747 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD28P10747 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CD28P10747 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD28P10747 SLC9A3P2-201ENST00000447821 2021 ntBASIC12.99□□□□□ -0.33
CD28P10747 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CD28P10747 AC139713.2-201ENST00000641328 2723 ntBASIC12.99□□□□□ -0.33
CD28P10747 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD28P10747 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CD28P10747 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD28P10747 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD28P10747 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CD28P10747 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CD28P10747 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
CD28P10747 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD28P10747 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD28P10747 CROCCP2-202ENST00000412962 2773 ntBASIC12.98□□□□□ -0.33
CD28P10747 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD28P10747 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD28P10747 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CD28P10747 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD28P10747 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC12.98□□□□□ -0.33
CD28P10747 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD28P10747 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD28P10747 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC12.98□□□□□ -0.33
CD28P10747 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC12.98□□□□□ -0.33
CD28P10747 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD28P10747 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CD28P10747 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
CD28P10747 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CD28P10747 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD28P10747 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.98□□□□□ -0.33
CD28P10747 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.98□□□□□ -0.33
CD28P10747 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC12.98□□□□□ -0.33
CD28P10747 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC12.98□□□□□ -0.33
CD28P10747 COX20P2-201ENST00000452636 358 ntBASIC12.98□□□□□ -0.33
CD28P10747 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.98□□□□□ -0.33
CD28P10747 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.98□□□□□ -0.33
CD28P10747 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD28P10747 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CD28P10747 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CD28P10747 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC12.98□□□□□ -0.33
CD28P10747 AC138761.1-201ENST00000584393 385 ntBASIC12.98□□□□□ -0.33
CD28P10747 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC12.98□□□□□ -0.33
CD28P10747 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.98□□□□□ -0.33
CD28P10747 AL390754.1-201ENST00000619088 582 ntBASIC12.98□□□□□ -0.33
CD28P10747 AJ011932.1-201ENST00000621707 465 ntBASIC12.98□□□□□ -0.33
CD28P10747 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.98□□□□□ -0.33
CD28P10747 AC084121.4-201ENST00000641598 221 ntBASIC12.98□□□□□ -0.33
CD28P10747 AF228730.8-201ENST00000642140 221 ntBASIC12.98□□□□□ -0.33
CD28P10747 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD28P10747 AC063926.3-201ENST00000624734 5658 ntBASIC12.98□□□□□ -0.33
CD28P10747 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
CD28P10747 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD28P10747 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD28P10747 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC12.98□□□□□ -0.33
CD28P10747 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
CD28P10747 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD28P10747 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.98□□□□□ -0.33
CD28P10747 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CD28P10747 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CD28P10747 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms