Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD48P09326 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD48P09326 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CD48P09326 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
CD48P09326 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD48P09326 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.22■□□□□ 0.35
CD48P09326 IL9RP2-201ENST00000423948 1312 ntBASIC17.22■□□□□ 0.35
CD48P09326 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD48P09326 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
CD48P09326 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CD48P09326 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CD48P09326 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.22■□□□□ 0.35
CD48P09326 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD48P09326 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD48P09326 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.22■□□□□ 0.35
CD48P09326 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
CD48P09326 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD48P09326 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD48P09326 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD48P09326 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD48P09326 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
CD48P09326 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.22■□□□□ 0.35
CD48P09326 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD48P09326 RNU1-129P-201ENST00000384064 167 ntBASIC17.22■□□□□ 0.35
CD48P09326 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CD48P09326 KRT18P2-201ENST00000447938 1258 ntBASIC17.22■□□□□ 0.35
CD48P09326 AC145285.3-201ENST00000564603 959 ntBASIC17.22■□□□□ 0.35
CD48P09326 U1.21-201ENST00000580816 167 ntBASIC17.22■□□□□ 0.35
CD48P09326 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CD48P09326 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CD48P09326 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.22■□□□□ 0.35
CD48P09326 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CD48P09326 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD48P09326 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CD48P09326 MTHFR-217ENST00000641820 1569 ntBASIC17.22■□□□□ 0.35
CD48P09326 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.22■□□□□ 0.35
CD48P09326 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD48P09326 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD48P09326 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
CD48P09326 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.22■□□□□ 0.35
CD48P09326 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.22■□□□□ 0.35
CD48P09326 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD48P09326 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD48P09326 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD48P09326 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CD48P09326 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
CD48P09326 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD48P09326 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD48P09326 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.21■□□□□ 0.35
CD48P09326 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD48P09326 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD48P09326 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD48P09326 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD48P09326 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD48P09326 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD48P09326 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD48P09326 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CD48P09326 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.21■□□□□ 0.35
CD48P09326 RHOQP3-201ENST00000437982 621 ntBASIC17.21■□□□□ 0.35
CD48P09326 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.21■□□□□ 0.35
CD48P09326 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CD48P09326 RPL13AP23-201ENST00000480739 586 ntBASIC17.21■□□□□ 0.35
CD48P09326 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.21■□□□□ 0.35
CD48P09326 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.21■□□□□ 0.35
CD48P09326 SLC25A1P1-201ENST00000528351 927 ntBASIC17.21■□□□□ 0.35
CD48P09326 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.21■□□□□ 0.35
CD48P09326 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.21■□□□□ 0.35
CD48P09326 AC096734.2-201ENST00000562054 433 ntBASIC17.21■□□□□ 0.35
CD48P09326 AC018845.2-201ENST00000568326 409 ntBASIC17.21■□□□□ 0.35
CD48P09326 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.21■□□□□ 0.35
CD48P09326 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CD48P09326 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD48P09326 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD48P09326 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD48P09326 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD48P09326 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD48P09326 AL513523.2-202ENST00000427283 2040 ntBASIC17.21■□□□□ 0.35
CD48P09326 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD48P09326 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD48P09326 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CD48P09326 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.2■□□□□ 0.34
CD48P09326 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD48P09326 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.2■□□□□ 0.34
CD48P09326 REXO1L8P-201ENST00000604378 1897 ntBASIC17.2■□□□□ 0.34
CD48P09326 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.2■□□□□ 0.34
CD48P09326 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.2■□□□□ 0.34
CD48P09326 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD48P09326 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.2■□□□□ 0.34
CD48P09326 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.2■□□□□ 0.34
CD48P09326 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.2■□□□□ 0.34
CD48P09326 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD48P09326 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
CD48P09326 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
CD48P09326 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.2■□□□□ 0.34
CD48P09326 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD48P09326 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD48P09326 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.2■□□□□ 0.34
CD48P09326 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CD48P09326 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CD48P09326 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms