Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GAPDHP04406 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
GAPDHP04406 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.97□□□□□ -0.17
GAPDHP04406 LINC00982-205ENST00000420957 435 ntBASIC13.97□□□□□ -0.17
GAPDHP04406 DUSP5P1-201ENST00000441325 1139 ntBASIC13.97□□□□□ -0.17
GAPDHP04406 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GAPDHP04406 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GAPDHP04406 AF238378.1-201ENST00000526806 358 ntBASIC13.97□□□□□ -0.17
GAPDHP04406 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
GAPDHP04406 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.97□□□□□ -0.17
GAPDHP04406 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.97□□□□□ -0.17
GAPDHP04406 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13.97□□□□□ -0.17
GAPDHP04406 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GAPDHP04406 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.97□□□□□ -0.17
GAPDHP04406 MTDHP4-201ENST00000600287 670 ntBASIC13.97□□□□□ -0.17
GAPDHP04406 AL589182.2-201ENST00000619332 1049 ntBASIC13.97□□□□□ -0.17
GAPDHP04406 AL691432.3-201ENST00000621860 400 ntBASIC13.97□□□□□ -0.17
GAPDHP04406 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
GAPDHP04406 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
GAPDHP04406 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
GAPDHP04406 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.97□□□□□ -0.17
GAPDHP04406 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.97□□□□□ -0.17
GAPDHP04406 GPR89P-201ENST00000407924 1495 ntBASIC13.97□□□□□ -0.17
GAPDHP04406 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GAPDHP04406 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC13.97□□□□□ -0.17
GAPDHP04406 AC004817.3-201ENST00000602957 2129 ntBASIC13.97□□□□□ -0.17
GAPDHP04406 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
GAPDHP04406 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GAPDHP04406 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GAPDHP04406 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.97□□□□□ -0.17
GAPDHP04406 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
GAPDHP04406 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.97□□□□□ -0.17
GAPDHP04406 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
GAPDHP04406 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GAPDHP04406 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.97□□□□□ -0.17
GAPDHP04406 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GAPDHP04406 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GAPDHP04406 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.97□□□□□ -0.17
GAPDHP04406 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GAPDHP04406 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GAPDHP04406 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.96□□□□□ -0.17
GAPDHP04406 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GAPDHP04406 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.96□□□□□ -0.17
GAPDHP04406 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
GAPDHP04406 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC13.96□□□□□ -0.17
GAPDHP04406 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC13.96□□□□□ -0.17
GAPDHP04406 PKD1P5-201ENST00000532415 10291 ntBASIC13.96□□□□□ -0.17
GAPDHP04406 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GAPDHP04406 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.96□□□□□ -0.17
GAPDHP04406 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.96□□□□□ -0.17
GAPDHP04406 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.96□□□□□ -0.17
GAPDHP04406 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.96□□□□□ -0.17
GAPDHP04406 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GAPDHP04406 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GAPDHP04406 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GAPDHP04406 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
GAPDHP04406 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
GAPDHP04406 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GAPDHP04406 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GAPDHP04406 AKR1C7P-201ENST00000305623 895 ntBASIC13.96□□□□□ -0.17
GAPDHP04406 AC004870.1-201ENST00000315132 882 ntBASIC13.96□□□□□ -0.17
GAPDHP04406 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
GAPDHP04406 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.96□□□□□ -0.17
GAPDHP04406 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.96□□□□□ -0.17
GAPDHP04406 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.96□□□□□ -0.17
GAPDHP04406 AL450487.1-201ENST00000426799 995 ntBASIC13.96□□□□□ -0.17
GAPDHP04406 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
GAPDHP04406 UNC93B7-201ENST00000509439 705 ntBASIC13.96□□□□□ -0.17
GAPDHP04406 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13.96□□□□□ -0.17
GAPDHP04406 SART3-203ENST00000546611 1184 ntBASIC13.96□□□□□ -0.17
GAPDHP04406 AC139887.3-201ENST00000568585 713 ntBASIC13.96□□□□□ -0.17
GAPDHP04406 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GAPDHP04406 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.96□□□□□ -0.17
GAPDHP04406 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GAPDHP04406 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC13.96□□□□□ -0.17
GAPDHP04406 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
GAPDHP04406 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.96□□□□□ -0.17
GAPDHP04406 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
GAPDHP04406 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GAPDHP04406 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
GAPDHP04406 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
GAPDHP04406 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
GAPDHP04406 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
GAPDHP04406 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
GAPDHP04406 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
GAPDHP04406 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
GAPDHP04406 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
GAPDHP04406 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
GAPDHP04406 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.96□□□□□ -0.18
GAPDHP04406 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
GAPDHP04406 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
GAPDHP04406 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
GAPDHP04406 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
GAPDHP04406 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.96□□□□□ -0.18
GAPDHP04406 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GAPDHP04406 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.95□□□□□ -0.18
GAPDHP04406 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.95□□□□□ -0.18
GAPDHP04406 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GAPDHP04406 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GAPDHP04406 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms