Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.75■□□□□ 0.11
MT-ND1P03886 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND1P03886 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.75■□□□□ 0.11
MT-ND1P03886 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.75■□□□□ 0.11
MT-ND1P03886 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND1P03886 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND1P03886 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND1P03886 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
MT-ND1P03886 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND1P03886 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND1P03886 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.75■□□□□ 0.11
MT-ND1P03886 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.75■□□□□ 0.11
MT-ND1P03886 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
MT-ND1P03886 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND1P03886 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND1P03886 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND1P03886 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.74■□□□□ 0.11
MT-ND1P03886 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND1P03886 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND1P03886 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND1P03886 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND1P03886 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.74■□□□□ 0.11
MT-ND1P03886 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND1P03886 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
MT-ND1P03886 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.74■□□□□ 0.11
MT-ND1P03886 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND1P03886 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND1P03886 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
MT-ND1P03886 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND1P03886 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
MT-ND1P03886 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.74■□□□□ 0.11
MT-ND1P03886 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND1P03886 NUS1P1-201ENST00000446295 882 ntBASIC15.74■□□□□ 0.11
MT-ND1P03886 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
MT-ND1P03886 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
MT-ND1P03886 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.74■□□□□ 0.11
MT-ND1P03886 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
MT-ND1P03886 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
MT-ND1P03886 AC148477.5-201ENST00000625164 1645 ntBASIC15.74■□□□□ 0.11
MT-ND1P03886 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND1P03886 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.74■□□□□ 0.11
MT-ND1P03886 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND1P03886 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.74■□□□□ 0.11
MT-ND1P03886 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND1P03886 PKD1P5-201ENST00000532415 10291 ntBASIC15.74■□□□□ 0.11
MT-ND1P03886 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND1P03886 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND1P03886 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND1P03886 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND1P03886 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
MT-ND1P03886 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND1P03886 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.74■□□□□ 0.11
MT-ND1P03886 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND1P03886 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND1P03886 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND1P03886 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND1P03886 AL671710.1-201ENST00000610245 2349 ntBASIC15.73■□□□□ 0.11
MT-ND1P03886 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND1P03886 KRT18P1-202ENST00000452408 1331 ntBASIC15.73■□□□□ 0.11
MT-ND1P03886 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND1P03886 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND1P03886 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.73■□□□□ 0.11
MT-ND1P03886 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
MT-ND1P03886 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.73■□□□□ 0.11
MT-ND1P03886 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
MT-ND1P03886 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND1P03886 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND1P03886 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND1P03886 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.73■□□□□ 0.11
MT-ND1P03886 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
MT-ND1P03886 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND1P03886 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND1P03886 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
MT-ND1P03886 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.73■□□□□ 0.11
MT-ND1P03886 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND1P03886 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.73■□□□□ 0.11
MT-ND1P03886 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.73■□□□□ 0.11
MT-ND1P03886 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND1P03886 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND1P03886 TSSC2-201ENST00000450217 709 ntBASIC15.73■□□□□ 0.11
MT-ND1P03886 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.73■□□□□ 0.11
MT-ND1P03886 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.73■□□□□ 0.11
MT-ND1P03886 Z69720.1-201ENST00000601483 472 ntBASIC15.73■□□□□ 0.11
MT-ND1P03886 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND1P03886 AD001527.2-201ENST00000622994 785 ntBASIC15.73■□□□□ 0.11
MT-ND1P03886 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND1P03886 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.73■□□□□ 0.11
MT-ND1P03886 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND1P03886 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
MT-ND1P03886 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.73■□□□□ 0.11
MT-ND1P03886 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.73■□□□□ 0.11
MT-ND1P03886 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.73■□□□□ 0.11
MT-ND1P03886 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
MT-ND1P03886 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.73■□□□□ 0.11
MT-ND1P03886 AC233702.3-201ENST00000578656 1387 ntBASIC15.73■□□□□ 0.11
MT-ND1P03886 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND1P03886 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
MT-ND1P03886 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
MT-ND1P03886 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND1P03886 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms