Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 SCARNA2-201ENST00000458748 420 ntBASIC14.99□□□□□ -0.01
HLA-DQA2P01906 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 AC139887.3-201ENST00000568585 713 ntBASIC14.99□□□□□ -0.01
HLA-DQA2P01906 AL139424.1-201ENST00000607572 797 ntBASIC14.99□□□□□ -0.01
HLA-DQA2P01906 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 AC006538.1-201ENST00000567905 1585 ntBASIC14.98□□□□□ -0.01
HLA-DQA2P01906 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 HLA-J-202ENST00000469281 1241 ntBASIC14.98□□□□□ -0.01
HLA-DQA2P01906 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 MTDHP4-201ENST00000600287 670 ntBASIC14.98□□□□□ -0.01
HLA-DQA2P01906 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 AL355877.3-201ENST00000622820 899 ntBASIC14.98□□□□□ -0.01
HLA-DQA2P01906 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 LINC02199-201ENST00000506655 2702 ntBASIC14.98□□□□□ -0.01
HLA-DQA2P01906 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQA2P01906 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.98□□□□□ -0.01
HLA-DQA2P01906 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 AC006277.1-201ENST00000624348 1610 ntBASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms