Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 AC027369.6-201ENST00000525520 931 ntBASIC15.86■□□□□ 0.13
DUX1O43812 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.86■□□□□ 0.13
DUX1O43812 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
DUX1O43812 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.86■□□□□ 0.13
DUX1O43812 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.86■□□□□ 0.13
DUX1O43812 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.86■□□□□ 0.13
DUX1O43812 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
DUX1O43812 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.86■□□□□ 0.13
DUX1O43812 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.86■□□□□ 0.13
DUX1O43812 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DUX1O43812 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
DUX1O43812 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
DUX1O43812 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DUX1O43812 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
DUX1O43812 AL645728.1-201ENST00000366221 2101 ntBASIC15.86■□□□□ 0.13
DUX1O43812 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
DUX1O43812 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
DUX1O43812 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
DUX1O43812 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
DUX1O43812 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DUX1O43812 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
DUX1O43812 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
DUX1O43812 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
DUX1O43812 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
DUX1O43812 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DUX1O43812 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.85■□□□□ 0.13
DUX1O43812 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
DUX1O43812 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
DUX1O43812 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
DUX1O43812 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
DUX1O43812 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.85■□□□□ 0.13
DUX1O43812 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.85■□□□□ 0.13
DUX1O43812 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.85■□□□□ 0.13
DUX1O43812 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
DUX1O43812 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
DUX1O43812 AC236430.1-201ENST00000402231 743 ntBASIC15.85■□□□□ 0.13
DUX1O43812 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
DUX1O43812 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
DUX1O43812 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.85■□□□□ 0.13
DUX1O43812 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.85■□□□□ 0.13
DUX1O43812 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.85■□□□□ 0.13
DUX1O43812 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.85■□□□□ 0.13
DUX1O43812 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.85■□□□□ 0.13
DUX1O43812 SPDYE12P-201ENST00000618416 771 ntBASIC15.85■□□□□ 0.13
DUX1O43812 AF228730.6-201ENST00000641497 218 ntBASIC15.85■□□□□ 0.13
DUX1O43812 AC084121.3-201ENST00000641716 218 ntBASIC15.85■□□□□ 0.13
DUX1O43812 AC105233.6-201ENST00000642093 218 ntBASIC15.85■□□□□ 0.13
DUX1O43812 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
DUX1O43812 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
DUX1O43812 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.85■□□□□ 0.13
DUX1O43812 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
DUX1O43812 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.85■□□□□ 0.13
DUX1O43812 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
DUX1O43812 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
DUX1O43812 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
DUX1O43812 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
DUX1O43812 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.85■□□□□ 0.13
DUX1O43812 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
DUX1O43812 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DUX1O43812 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
DUX1O43812 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DUX1O43812 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DUX1O43812 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DUX1O43812 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
DUX1O43812 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
DUX1O43812 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.84■□□□□ 0.13
DUX1O43812 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
DUX1O43812 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.84■□□□□ 0.13
DUX1O43812 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.84■□□□□ 0.13
DUX1O43812 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
DUX1O43812 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.84■□□□□ 0.13
DUX1O43812 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DUX1O43812 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DUX1O43812 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.84■□□□□ 0.13
DUX1O43812 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DUX1O43812 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DUX1O43812 MIR661-201ENST00000384842 89 ntBASIC15.84■□□□□ 0.13
DUX1O43812 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
DUX1O43812 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.84■□□□□ 0.13
DUX1O43812 AC015922.1-201ENST00000421102 1152 ntBASIC15.84■□□□□ 0.13
DUX1O43812 FAM207CP-201ENST00000443486 507 ntBASIC15.84■□□□□ 0.13
DUX1O43812 UGT1A2P-201ENST00000454886 866 ntBASIC15.84■□□□□ 0.13
DUX1O43812 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.84■□□□□ 0.13
DUX1O43812 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.84■□□□□ 0.13
DUX1O43812 AC190387.1-201ENST00000551683 408 ntBASIC15.84■□□□□ 0.13
DUX1O43812 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.84■□□□□ 0.13
DUX1O43812 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
DUX1O43812 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.84■□□□□ 0.13
DUX1O43812 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.84■□□□□ 0.13
DUX1O43812 AL512652.2-201ENST00000625156 1716 ntBASIC15.84■□□□□ 0.13
DUX1O43812 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DUX1O43812 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DUX1O43812 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
DUX1O43812 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
DUX1O43812 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DUX1O43812 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DUX1O43812 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DUX1O43812 AC100757.3-201ENST00000622361 1406 ntBASIC15.84■□□□□ 0.13
DUX1O43812 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DUX1O43812 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms