Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.73■□□□□ 0.27
SMAD6O43541 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.73■□□□□ 0.27
SMAD6O43541 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMAD6O43541 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMAD6O43541 GGT3P-204ENST00000453783 1664 ntBASIC16.73■□□□□ 0.27
SMAD6O43541 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SMAD6O43541 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMAD6O43541 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.73■□□□□ 0.27
SMAD6O43541 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMAD6O43541 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
SMAD6O43541 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.73■□□□□ 0.27
SMAD6O43541 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.73■□□□□ 0.27
SMAD6O43541 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SMAD6O43541 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.73■□□□□ 0.27
SMAD6O43541 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.73■□□□□ 0.27
SMAD6O43541 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.73■□□□□ 0.27
SMAD6O43541 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SMAD6O43541 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.73■□□□□ 0.27
SMAD6O43541 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.73■□□□□ 0.27
SMAD6O43541 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.73■□□□□ 0.27
SMAD6O43541 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.73■□□□□ 0.27
SMAD6O43541 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.73■□□□□ 0.27
SMAD6O43541 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.73■□□□□ 0.27
SMAD6O43541 AC020765.3-201ENST00000613051 740 ntBASIC16.73■□□□□ 0.27
SMAD6O43541 AP001059.3-201ENST00000619053 235 ntBASIC16.73■□□□□ 0.27
SMAD6O43541 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.73■□□□□ 0.27
SMAD6O43541 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.73■□□□□ 0.27
SMAD6O43541 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SMAD6O43541 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.73■□□□□ 0.27
SMAD6O43541 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SMAD6O43541 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.73■□□□□ 0.27
SMAD6O43541 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMAD6O43541 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.73■□□□□ 0.27
SMAD6O43541 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.73■□□□□ 0.27
SMAD6O43541 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SMAD6O43541 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMAD6O43541 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMAD6O43541 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMAD6O43541 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMAD6O43541 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMAD6O43541 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMAD6O43541 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMAD6O43541 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SMAD6O43541 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMAD6O43541 NKILA-202ENST00000614771 2598 ntBASIC16.72■□□□□ 0.27
SMAD6O43541 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMAD6O43541 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.72■□□□□ 0.27
SMAD6O43541 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.72■□□□□ 0.27
SMAD6O43541 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.72■□□□□ 0.27
SMAD6O43541 CYMP-203ENST00000474680 1263 ntBASIC16.72■□□□□ 0.27
SMAD6O43541 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SMAD6O43541 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SMAD6O43541 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.72■□□□□ 0.27
SMAD6O43541 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.72■□□□□ 0.27
SMAD6O43541 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
SMAD6O43541 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.72■□□□□ 0.27
SMAD6O43541 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMAD6O43541 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.72■□□□□ 0.27
SMAD6O43541 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMAD6O43541 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMAD6O43541 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.72■□□□□ 0.27
SMAD6O43541 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMAD6O43541 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMAD6O43541 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SMAD6O43541 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMAD6O43541 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMAD6O43541 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SMAD6O43541 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SMAD6O43541 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMAD6O43541 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMAD6O43541 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SMAD6O43541 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.71■□□□□ 0.27
SMAD6O43541 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMAD6O43541 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMAD6O43541 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMAD6O43541 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMAD6O43541 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SMAD6O43541 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.71■□□□□ 0.27
SMAD6O43541 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.71■□□□□ 0.27
SMAD6O43541 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.71■□□□□ 0.27
SMAD6O43541 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMAD6O43541 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.71■□□□□ 0.27
SMAD6O43541 AL512356.2-201ENST00000546955 174 ntBASIC16.71■□□□□ 0.27
SMAD6O43541 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.71■□□□□ 0.27
SMAD6O43541 AL355385.1-201ENST00000606123 409 ntBASIC16.71■□□□□ 0.27
SMAD6O43541 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.71■□□□□ 0.27
SMAD6O43541 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.71■□□□□ 0.27
SMAD6O43541 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMAD6O43541 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMAD6O43541 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SMAD6O43541 AC008677.1-201ENST00000519230 1561 ntBASIC16.71■□□□□ 0.27
SMAD6O43541 PCGF3-213ENST00000620529 1899 ntBASIC16.71■□□□□ 0.27
SMAD6O43541 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SMAD6O43541 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.71■□□□□ 0.27
SMAD6O43541 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMAD6O43541 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
SMAD6O43541 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SMAD6O43541 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.26
SMAD6O43541 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
SMAD6O43541 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms