Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CASQ2O14958 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.83■□□□□ 0.12
CASQ2O14958 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CASQ2O14958 AC016027.1-202ENST00000607927 1699 ntBASIC15.83■□□□□ 0.12
CASQ2O14958 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CASQ2O14958 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASQ2O14958 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASQ2O14958 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASQ2O14958 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CASQ2O14958 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASQ2O14958 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CASQ2O14958 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CASQ2O14958 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.82■□□□□ 0.12
CASQ2O14958 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
CASQ2O14958 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.82■□□□□ 0.12
CASQ2O14958 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC15.82■□□□□ 0.12
CASQ2O14958 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASQ2O14958 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASQ2O14958 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.82■□□□□ 0.12
CASQ2O14958 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CASQ2O14958 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CASQ2O14958 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.82■□□□□ 0.12
CASQ2O14958 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.82■□□□□ 0.12
CASQ2O14958 AC007663.1-201ENST00000438948 1240 ntBASIC15.82■□□□□ 0.12
CASQ2O14958 CCR12P-201ENST00000446203 998 ntBASIC15.82■□□□□ 0.12
CASQ2O14958 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.82■□□□□ 0.12
CASQ2O14958 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.82■□□□□ 0.12
CASQ2O14958 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CASQ2O14958 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CASQ2O14958 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CASQ2O14958 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CASQ2O14958 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.82■□□□□ 0.12
CASQ2O14958 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASQ2O14958 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CASQ2O14958 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CASQ2O14958 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CASQ2O14958 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASQ2O14958 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASQ2O14958 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASQ2O14958 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASQ2O14958 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.82■□□□□ 0.12
CASQ2O14958 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASQ2O14958 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.82■□□□□ 0.12
CASQ2O14958 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASQ2O14958 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASQ2O14958 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
CASQ2O14958 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.82■□□□□ 0.12
CASQ2O14958 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.82■□□□□ 0.12
CASQ2O14958 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASQ2O14958 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASQ2O14958 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
CASQ2O14958 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASQ2O14958 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASQ2O14958 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CASQ2O14958 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASQ2O14958 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASQ2O14958 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASQ2O14958 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.81■□□□□ 0.12
CASQ2O14958 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.81■□□□□ 0.12
CASQ2O14958 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.81■□□□□ 0.12
CASQ2O14958 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASQ2O14958 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.81■□□□□ 0.12
CASQ2O14958 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CASQ2O14958 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.81■□□□□ 0.12
CASQ2O14958 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CASQ2O14958 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC15.81■□□□□ 0.12
CASQ2O14958 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CASQ2O14958 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CASQ2O14958 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CASQ2O14958 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.81■□□□□ 0.12
CASQ2O14958 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.81■□□□□ 0.12
CASQ2O14958 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CASQ2O14958 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CASQ2O14958 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.81■□□□□ 0.12
CASQ2O14958 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.81■□□□□ 0.12
CASQ2O14958 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CASQ2O14958 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CASQ2O14958 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.81■□□□□ 0.12
CASQ2O14958 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CASQ2O14958 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
CASQ2O14958 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CASQ2O14958 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASQ2O14958 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.81■□□□□ 0.12
CASQ2O14958 AC023908.3-201ENST00000564211 3047 ntBASIC15.81■□□□□ 0.12
CASQ2O14958 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASQ2O14958 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASQ2O14958 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASQ2O14958 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASQ2O14958 SSR4P1-203ENST00000599569 2260 ntBASIC15.8■□□□□ 0.12
CASQ2O14958 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.8■□□□□ 0.12
CASQ2O14958 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASQ2O14958 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASQ2O14958 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASQ2O14958 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CASQ2O14958 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.8■□□□□ 0.12
CASQ2O14958 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
CASQ2O14958 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASQ2O14958 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASQ2O14958 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CASQ2O14958 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms