Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH17O14917 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PCDH17O14917 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH17O14917 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
PCDH17O14917 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH17O14917 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH17O14917 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PCDH17O14917 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH17O14917 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH17O14917 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDH17O14917 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH17O14917 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDH17O14917 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PCDH17O14917 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDH17O14917 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PCDH17O14917 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH17O14917 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH17O14917 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH17O14917 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH17O14917 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.9■□□□□ 0.14
PCDH17O14917 AC211486.1-202ENST00000416371 468 ntBASIC15.9■□□□□ 0.14
PCDH17O14917 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDH17O14917 AC211476.1-201ENST00000503899 468 ntBASIC15.9■□□□□ 0.14
PCDH17O14917 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDH17O14917 AL031432.2-201ENST00000566714 459 ntBASIC15.9■□□□□ 0.14
PCDH17O14917 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH17O14917 AL928711.1-201ENST00000570165 459 ntBASIC15.9■□□□□ 0.14
PCDH17O14917 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
PCDH17O14917 AC068137.2-201ENST00000605408 478 ntBASIC15.9■□□□□ 0.14
PCDH17O14917 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
PCDH17O14917 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH17O14917 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDH17O14917 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PCDH17O14917 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH17O14917 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PCDH17O14917 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PCDH17O14917 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH17O14917 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH17O14917 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH17O14917 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH17O14917 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH17O14917 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDH17O14917 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH17O14917 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH17O14917 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
PCDH17O14917 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.89■□□□□ 0.13
PCDH17O14917 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH17O14917 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PCDH17O14917 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH17O14917 HTR5BP-201ENST00000430851 1154 ntBASIC15.89■□□□□ 0.13
PCDH17O14917 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH17O14917 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.89■□□□□ 0.13
PCDH17O14917 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.89■□□□□ 0.13
PCDH17O14917 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.89■□□□□ 0.13
PCDH17O14917 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.89■□□□□ 0.13
PCDH17O14917 AC112191.1-201ENST00000523689 701 ntBASIC15.89■□□□□ 0.13
PCDH17O14917 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
PCDH17O14917 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDH17O14917 AC027796.2-201ENST00000575326 344 ntBASIC15.89■□□□□ 0.13
PCDH17O14917 AC091167.2-201ENST00000579581 588 ntBASIC15.89■□□□□ 0.13
PCDH17O14917 AL513190.1-201ENST00000621254 727 ntBASIC15.89■□□□□ 0.13
PCDH17O14917 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH17O14917 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PCDH17O14917 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH17O14917 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.89■□□□□ 0.13
PCDH17O14917 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH17O14917 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDH17O14917 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH17O14917 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDH17O14917 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
PCDH17O14917 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDH17O14917 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PCDH17O14917 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDH17O14917 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
PCDH17O14917 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
PCDH17O14917 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.88■□□□□ 0.13
PCDH17O14917 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH17O14917 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
PCDH17O14917 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH17O14917 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH17O14917 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
PCDH17O14917 ELL2P1-201ENST00000413990 1906 ntBASIC15.88■□□□□ 0.13
PCDH17O14917 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH17O14917 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH17O14917 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH17O14917 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH17O14917 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH17O14917 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH17O14917 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH17O14917 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH17O14917 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH17O14917 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH17O14917 AC002056.1-201ENST00000395613 760 ntBASIC15.88■□□□□ 0.13
PCDH17O14917 AC254562.1-201ENST00000417586 456 ntBASIC15.88■□□□□ 0.13
PCDH17O14917 HCG4-201ENST00000418983 998 ntBASIC15.88■□□□□ 0.13
PCDH17O14917 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
PCDH17O14917 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PCDH17O14917 DNAJB3-202ENST00000449667 1266 ntBASIC15.88■□□□□ 0.13
PCDH17O14917 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDH17O14917 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms