Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 SIGLEC30P-201ENST00000455569 941 ntBASIC11.72□□□□□ -0.53
LINC01546A6NGU7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 AC105250.1-201ENST00000509378 2057 ntBASIC11.72□□□□□ -0.53
LINC01546A6NGU7 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 AC090616.6-203ENST00000579186 1945 ntBASIC11.72□□□□□ -0.53
LINC01546A6NGU7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 LINC00552-201ENST00000625151 2579 ntBASIC11.72□□□□□ -0.53
LINC01546A6NGU7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01546A6NGU7 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC11.71□□□□□ -0.53
LINC01546A6NGU7 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01546A6NGU7 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01546A6NGU7 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
LINC01546A6NGU7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC11.71□□□□□ -0.53
LINC01546A6NGU7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
LINC01546A6NGU7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC11.71□□□□□ -0.53
LINC01546A6NGU7 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01546A6NGU7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01546A6NGU7 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01546A6NGU7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
LINC01546A6NGU7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC11.71□□□□□ -0.53
LINC01546A6NGU7 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC11.71□□□□□ -0.53
LINC01546A6NGU7 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
LINC01546A6NGU7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01546A6NGU7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01546A6NGU7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC11.71□□□□□ -0.53
LINC01546A6NGU7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
LINC01546A6NGU7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC11.71□□□□□ -0.53
LINC01546A6NGU7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01546A6NGU7 STARP1-201ENST00000397973 869 ntBASIC11.71□□□□□ -0.53
LINC01546A6NGU7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
LINC01546A6NGU7 AC020765.3-201ENST00000613051 740 ntBASIC11.71□□□□□ -0.53
LINC01546A6NGU7 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC11.71□□□□□ -0.53
LINC01546A6NGU7 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC11.71□□□□□ -0.53
LINC01546A6NGU7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC11.71□□□□□ -0.53
LINC01546A6NGU7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01546A6NGU7 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC11.71□□□□□ -0.53
LINC01546A6NGU7 AC005912.2-201ENST00000619492 2400 ntBASIC11.71□□□□□ -0.54
LINC01546A6NGU7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
LINC01546A6NGU7 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01546A6NGU7 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC11.71□□□□□ -0.54
LINC01546A6NGU7 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC11.71□□□□□ -0.54
LINC01546A6NGU7 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01546A6NGU7 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01546A6NGU7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
LINC01546A6NGU7 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
LINC01546A6NGU7 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01546A6NGU7 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01546A6NGU7 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01546A6NGU7 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms