Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 AC142381.1-201ENST00000426099 345 ntBASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 TSPY16P-201ENST00000449843 468 ntBASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 AL512638.1-201ENST00000457493 794 ntBASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 AC097493.3-201ENST00000509725 367 ntBASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 IGHV3-42-201ENST00000520410 361 ntBASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 TERF1P3-201ENST00000505638 1227 ntBASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 MIR4453-201ENST00000584019 89 ntBASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 AC018529.1-201ENST00000613063 361 ntBASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 AL513477.1-201ENST00000602865 2407 ntBASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.25■□□□□ 0.19
CSNK1G3Q9Y6M4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CSNK1G3Q9Y6M4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
CSNK1G3Q9Y6M4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSNK1G3Q9Y6M4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSNK1G3Q9Y6M4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSNK1G3Q9Y6M4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.24■□□□□ 0.19
CSNK1G3Q9Y6M4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSNK1G3Q9Y6M4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSNK1G3Q9Y6M4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CSNK1G3Q9Y6M4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CSNK1G3Q9Y6M4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSNK1G3Q9Y6M4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSNK1G3Q9Y6M4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSNK1G3Q9Y6M4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
CSNK1G3Q9Y6M4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CSNK1G3Q9Y6M4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms