Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 AC027307.2-201ENST00000591252 911 ntBASIC18.17■□□□□ 0.5
PCDHB2Q9Y5E7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB2Q9Y5E7 AC021097.1-201ENST00000607902 574 ntBASIC18.17■□□□□ 0.5
PCDHB2Q9Y5E7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PCDHB2Q9Y5E7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB2Q9Y5E7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB2Q9Y5E7 FLJ38576-201ENST00000623820 2459 ntBASIC18.17■□□□□ 0.5
PCDHB2Q9Y5E7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB2Q9Y5E7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PCDHB2Q9Y5E7 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHB2Q9Y5E7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB2Q9Y5E7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
PCDHB2Q9Y5E7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
PCDHB2Q9Y5E7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
PCDHB2Q9Y5E7 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB2Q9Y5E7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 LINC00895-201ENST00000629028 1637 ntBASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 CNN2P2-201ENST00000443536 909 ntBASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 CNN2P3-201ENST00000450201 906 ntBASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 AC067863.1-201ENST00000494933 530 ntBASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 SLC25A39P2-201ENST00000537614 270 ntBASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 AC069262.1-201ENST00000539058 672 ntBASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 AC026150.2-201ENST00000564693 1156 ntBASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 AC011467.4-201ENST00000594891 528 ntBASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 AL136317.3-201ENST00000618497 906 ntBASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 AC084018.2-201ENST00000613093 2607 ntBASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PCDHB2Q9Y5E7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
PCDHB2Q9Y5E7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB2Q9Y5E7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB2Q9Y5E7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB2Q9Y5E7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHB2Q9Y5E7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB2Q9Y5E7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB2Q9Y5E7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHB2Q9Y5E7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
PCDHB2Q9Y5E7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB2Q9Y5E7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB2Q9Y5E7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB2Q9Y5E7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB2Q9Y5E7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
PCDHB2Q9Y5E7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PCDHB2Q9Y5E7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PCDHB2Q9Y5E7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHB2Q9Y5E7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB2Q9Y5E7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
PCDHB2Q9Y5E7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB2Q9Y5E7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
PCDHB2Q9Y5E7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB2Q9Y5E7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHB2Q9Y5E7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHB2Q9Y5E7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHB2Q9Y5E7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
PCDHB2Q9Y5E7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.15■□□□□ 0.5
PCDHB2Q9Y5E7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.15■□□□□ 0.5
PCDHB2Q9Y5E7 DUX4L27-201ENST00000554796 1261 ntBASIC18.15■□□□□ 0.5
PCDHB2Q9Y5E7 AP000842.3-202ENST00000569238 1080 ntBASIC18.15■□□□□ 0.5
PCDHB2Q9Y5E7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms