Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 AC245100.5-201ENST00000452108 331 ntBASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 AL139010.1-201ENST00000454878 894 ntBASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 BTBD7P1-201ENST00000447253 1453 ntBASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPO2Q9UMS6 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPO2Q9UMS6 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPO2Q9UMS6 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPO2Q9UMS6 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPO2Q9UMS6 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SYNPO2Q9UMS6 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPO2Q9UMS6 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.96■□□□□ 0.63
SYNPO2Q9UMS6 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPO2Q9UMS6 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.96■□□□□ 0.63
SYNPO2Q9UMS6 COX20P2-201ENST00000452636 358 ntBASIC18.96■□□□□ 0.63
SYNPO2Q9UMS6 SERBP1P3-201ENST00000459980 809 ntBASIC18.96■□□□□ 0.63
SYNPO2Q9UMS6 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.96■□□□□ 0.63
SYNPO2Q9UMS6 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.96■□□□□ 0.63
SYNPO2Q9UMS6 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPO2Q9UMS6 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.96■□□□□ 0.63
SYNPO2Q9UMS6 LINC02560-201ENST00000596379 459 ntBASIC18.96■□□□□ 0.63
SYNPO2Q9UMS6 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
SYNPO2Q9UMS6 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPO2Q9UMS6 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.96■□□□□ 0.63
SYNPO2Q9UMS6 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPO2Q9UMS6 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SYNPO2Q9UMS6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.96■□□□□ 0.63
SYNPO2Q9UMS6 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SYNPO2Q9UMS6 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPO2Q9UMS6 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPO2Q9UMS6 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPO2Q9UMS6 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYNPO2Q9UMS6 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.95■□□□□ 0.62
SYNPO2Q9UMS6 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.95■□□□□ 0.62
SYNPO2Q9UMS6 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYNPO2Q9UMS6 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SYNPO2Q9UMS6 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
SYNPO2Q9UMS6 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYNPO2Q9UMS6 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.95■□□□□ 0.62
SYNPO2Q9UMS6 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYNPO2Q9UMS6 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.95■□□□□ 0.62
SYNPO2Q9UMS6 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
SYNPO2Q9UMS6 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYNPO2Q9UMS6 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.95■□□□□ 0.62
SYNPO2Q9UMS6 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.95■□□□□ 0.62
SYNPO2Q9UMS6 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.95■□□□□ 0.62
SYNPO2Q9UMS6 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.95■□□□□ 0.62
SYNPO2Q9UMS6 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SYNPO2Q9UMS6 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.95■□□□□ 0.62
SYNPO2Q9UMS6 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.95■□□□□ 0.62
SYNPO2Q9UMS6 AC190387.1-201ENST00000551683 408 ntBASIC18.95■□□□□ 0.62
SYNPO2Q9UMS6 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SYNPO2Q9UMS6 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SYNPO2Q9UMS6 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.95■□□□□ 0.62
SYNPO2Q9UMS6 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.95■□□□□ 0.62
SYNPO2Q9UMS6 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
SYNPO2Q9UMS6 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
SYNPO2Q9UMS6 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SYNPO2Q9UMS6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.94■□□□□ 0.62
SYNPO2Q9UMS6 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPO2Q9UMS6 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.94■□□□□ 0.62
SYNPO2Q9UMS6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPO2Q9UMS6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
SYNPO2Q9UMS6 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SYNPO2Q9UMS6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPO2Q9UMS6 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.94■□□□□ 0.62
SYNPO2Q9UMS6 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPO2Q9UMS6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.94■□□□□ 0.62
SYNPO2Q9UMS6 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.94■□□□□ 0.62
SYNPO2Q9UMS6 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPO2Q9UMS6 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPO2Q9UMS6 AC009407.1-201ENST00000568958 598 ntBASIC18.94■□□□□ 0.62
SYNPO2Q9UMS6 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.94■□□□□ 0.62
SYNPO2Q9UMS6 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.94■□□□□ 0.62
SYNPO2Q9UMS6 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
SYNPO2Q9UMS6 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPO2Q9UMS6 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPO2Q9UMS6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPO2Q9UMS6 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms