Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNRF3Q9ULT6 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNRF3Q9ULT6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
ZNRF3Q9ULT6 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC19.74■□□□□ 0.75
ZNRF3Q9ULT6 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC19.74■□□□□ 0.75
ZNRF3Q9ULT6 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.74■□□□□ 0.75
ZNRF3Q9ULT6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNRF3Q9ULT6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNRF3Q9ULT6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNRF3Q9ULT6 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNRF3Q9ULT6 ANKRD19P-201ENST00000338192 862 ntBASIC19.74■□□□□ 0.75
ZNRF3Q9ULT6 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC19.74■□□□□ 0.75
ZNRF3Q9ULT6 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC19.74■□□□□ 0.75
ZNRF3Q9ULT6 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
ZNRF3Q9ULT6 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC19.74■□□□□ 0.75
ZNRF3Q9ULT6 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC19.74■□□□□ 0.75
ZNRF3Q9ULT6 AC104989.1-201ENST00000519711 778 ntBASIC19.74■□□□□ 0.75
ZNRF3Q9ULT6 FAM8A2P-201ENST00000528813 1142 ntBASIC19.74■□□□□ 0.75
ZNRF3Q9ULT6 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ZNRF3Q9ULT6 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC19.74■□□□□ 0.75
ZNRF3Q9ULT6 AL139011.1-202ENST00000642063 584 ntBASIC19.74■□□□□ 0.75
ZNRF3Q9ULT6 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNRF3Q9ULT6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.74■□□□□ 0.75
ZNRF3Q9ULT6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNRF3Q9ULT6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
ZNRF3Q9ULT6 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.74■□□□□ 0.75
ZNRF3Q9ULT6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNRF3Q9ULT6 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ZNRF3Q9ULT6 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNRF3Q9ULT6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.74■□□□□ 0.75
ZNRF3Q9ULT6 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ZNRF3Q9ULT6 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
ZNRF3Q9ULT6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNRF3Q9ULT6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ZNRF3Q9ULT6 CDC14C-201ENST00000428251 1719 ntBASIC19.73■□□□□ 0.75
ZNRF3Q9ULT6 NEFHP1-201ENST00000412845 2629 ntBASIC19.73■□□□□ 0.75
ZNRF3Q9ULT6 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNRF3Q9ULT6 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNRF3Q9ULT6 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNRF3Q9ULT6 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ZNRF3Q9ULT6 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNRF3Q9ULT6 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC19.73■□□□□ 0.75
ZNRF3Q9ULT6 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ZNRF3Q9ULT6 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC19.73■□□□□ 0.75
ZNRF3Q9ULT6 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC19.73■□□□□ 0.75
ZNRF3Q9ULT6 BNIP3P42-201ENST00000454982 569 ntBASIC19.73■□□□□ 0.75
ZNRF3Q9ULT6 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ZNRF3Q9ULT6 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC19.73■□□□□ 0.75
ZNRF3Q9ULT6 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC19.73■□□□□ 0.75
ZNRF3Q9ULT6 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ZNRF3Q9ULT6 TIMM17BP1-201ENST00000545713 516 ntBASIC19.73■□□□□ 0.75
ZNRF3Q9ULT6 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC19.73■□□□□ 0.75
ZNRF3Q9ULT6 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNRF3Q9ULT6 BTNL10-201ENST00000595971 695 ntBASIC19.73■□□□□ 0.75
ZNRF3Q9ULT6 BNIP3P29-201ENST00000598302 571 ntBASIC19.73■□□□□ 0.75
ZNRF3Q9ULT6 AC074044.1-201ENST00000609673 707 ntBASIC19.73■□□□□ 0.75
ZNRF3Q9ULT6 AC011447.5-201ENST00000616168 564 ntBASIC19.73■□□□□ 0.75
ZNRF3Q9ULT6 PFAS-212ENST00000625942 396 ntTSL 5 BASIC19.73■□□□□ 0.75
ZNRF3Q9ULT6 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ZNRF3Q9ULT6 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ZNRF3Q9ULT6 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.73■□□□□ 0.75
ZNRF3Q9ULT6 AL512652.2-201ENST00000625156 1716 ntBASIC19.73■□□□□ 0.75
ZNRF3Q9ULT6 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNRF3Q9ULT6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ZNRF3Q9ULT6 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNRF3Q9ULT6 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.73■□□□□ 0.75
ZNRF3Q9ULT6 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
ZNRF3Q9ULT6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNRF3Q9ULT6 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNRF3Q9ULT6 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNRF3Q9ULT6 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
ZNRF3Q9ULT6 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
ZNRF3Q9ULT6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
ZNRF3Q9ULT6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNRF3Q9ULT6 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
ZNRF3Q9ULT6 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNRF3Q9ULT6 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNRF3Q9ULT6 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNRF3Q9ULT6 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ZNRF3Q9ULT6 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ZNRF3Q9ULT6 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC19.72■□□□□ 0.75
ZNRF3Q9ULT6 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC19.72■□□□□ 0.75
ZNRF3Q9ULT6 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNRF3Q9ULT6 RARRES2P5-201ENST00000564013 466 ntBASIC19.72■□□□□ 0.75
ZNRF3Q9ULT6 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNRF3Q9ULT6 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNRF3Q9ULT6 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC19.72■□□□□ 0.75
ZNRF3Q9ULT6 AC084346.2-201ENST00000607097 949 ntBASIC19.72■□□□□ 0.75
ZNRF3Q9ULT6 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNRF3Q9ULT6 SNX12-206ENST00000622259 661 ntTSL 5 BASIC19.72■□□□□ 0.75
ZNRF3Q9ULT6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ZNRF3Q9ULT6 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNRF3Q9ULT6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNRF3Q9ULT6 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNRF3Q9ULT6 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNRF3Q9ULT6 CLK3P2-201ENST00000427566 1453 ntBASIC19.72■□□□□ 0.75
ZNRF3Q9ULT6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNRF3Q9ULT6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNRF3Q9ULT6 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.72■□□□□ 0.75
ZNRF3Q9ULT6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms