Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH9Q9ULB4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH9Q9ULB4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH9Q9ULB4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH9Q9ULB4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH9Q9ULB4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH9Q9ULB4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.53■□□□□ 0.4
CDH9Q9ULB4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.53■□□□□ 0.4
CDH9Q9ULB4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CDH9Q9ULB4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH9Q9ULB4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH9Q9ULB4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.53■□□□□ 0.4
CDH9Q9ULB4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CDH9Q9ULB4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDH9Q9ULB4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.52■□□□□ 0.4
CDH9Q9ULB4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDH9Q9ULB4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH9Q9ULB4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH9Q9ULB4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH9Q9ULB4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.52■□□□□ 0.4
CDH9Q9ULB4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CDH9Q9ULB4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH9Q9ULB4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH9Q9ULB4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH9Q9ULB4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CDH9Q9ULB4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH9Q9ULB4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDH9Q9ULB4 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.52■□□□□ 0.4
CDH9Q9ULB4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.52■□□□□ 0.4
CDH9Q9ULB4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDH9Q9ULB4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.52■□□□□ 0.4
CDH9Q9ULB4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.52■□□□□ 0.4
CDH9Q9ULB4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.52■□□□□ 0.4
CDH9Q9ULB4 ALG1L8P-201ENST00000533887 760 ntBASIC17.52■□□□□ 0.4
CDH9Q9ULB4 AC026150.2-201ENST00000564693 1156 ntBASIC17.52■□□□□ 0.4
CDH9Q9ULB4 AC027796.2-201ENST00000575326 344 ntBASIC17.52■□□□□ 0.4
CDH9Q9ULB4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.52■□□□□ 0.4
CDH9Q9ULB4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.52■□□□□ 0.4
CDH9Q9ULB4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.52■□□□□ 0.4
CDH9Q9ULB4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.52■□□□□ 0.4
CDH9Q9ULB4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.52■□□□□ 0.4
CDH9Q9ULB4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CDH9Q9ULB4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH9Q9ULB4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.52■□□□□ 0.39
CDH9Q9ULB4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH9Q9ULB4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CDH9Q9ULB4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.52■□□□□ 0.39
CDH9Q9ULB4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 SPDYE14P-201ENST00000442619 822 ntBASIC17.51■□□□□ 0.39
CDH9Q9ULB4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 RFPL4AP1-201ENST00000530883 850 ntBASIC17.51■□□□□ 0.39
CDH9Q9ULB4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 AC015911.4-201ENST00000588022 1070 ntBASIC17.51■□□□□ 0.39
CDH9Q9ULB4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 GGT3P-204ENST00000453783 1664 ntBASIC17.51■□□□□ 0.39
CDH9Q9ULB4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 AC106886.4-201ENST00000623557 2502 ntBASIC17.51■□□□□ 0.39
CDH9Q9ULB4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH9Q9ULB4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH9Q9ULB4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH9Q9ULB4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH9Q9ULB4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH9Q9ULB4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CDH9Q9ULB4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH9Q9ULB4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH9Q9ULB4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH9Q9ULB4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH9Q9ULB4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CDH9Q9ULB4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH9Q9ULB4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH9Q9ULB4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.5■□□□□ 0.39
CDH9Q9ULB4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms