Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.79■□□□□ 0.6
HDAC6Q9UBN7 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.79■□□□□ 0.6
HDAC6Q9UBN7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HDAC6Q9UBN7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.79■□□□□ 0.6
HDAC6Q9UBN7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.79■□□□□ 0.6
HDAC6Q9UBN7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
HDAC6Q9UBN7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HDAC6Q9UBN7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.79■□□□□ 0.6
HDAC6Q9UBN7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HDAC6Q9UBN7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HDAC6Q9UBN7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HDAC6Q9UBN7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
HDAC6Q9UBN7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HDAC6Q9UBN7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
HDAC6Q9UBN7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.79■□□□□ 0.6
HDAC6Q9UBN7 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HDAC6Q9UBN7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 LINC01225-203ENST00000563550 1244 ntBASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 AP001059.3-201ENST00000619053 235 ntBASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HDAC6Q9UBN7 AL353732.1-201ENST00000569618 1459 ntBASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 AC092474.2-201ENST00000424288 719 ntBASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 RBPMS2P1-201ENST00000437762 623 ntBASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 CNN2P2-201ENST00000443536 909 ntBASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 CNN2P3-201ENST00000450201 906 ntBASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 AL512356.2-201ENST00000546955 174 ntBASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 AL136317.3-201ENST00000618497 906 ntBASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 DOC2GP-204ENST00000639052 2548 ntBASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HDAC6Q9UBN7 LINC02199-201ENST00000506655 2702 ntBASIC18.77■□□□□ 0.59
HDAC6Q9UBN7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HDAC6Q9UBN7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
HDAC6Q9UBN7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
HDAC6Q9UBN7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
HDAC6Q9UBN7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.77■□□□□ 0.59
HDAC6Q9UBN7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
HDAC6Q9UBN7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.59
HDAC6Q9UBN7 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HDAC6Q9UBN7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HDAC6Q9UBN7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HDAC6Q9UBN7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms