Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLCF1Q9UBD9 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
CLCF1Q9UBD9 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.77□□□□□ -0.05
CLCF1Q9UBD9 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLCF1Q9UBD9 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.77□□□□□ -0.05
CLCF1Q9UBD9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLCF1Q9UBD9 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLCF1Q9UBD9 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.77□□□□□ -0.05
CLCF1Q9UBD9 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLCF1Q9UBD9 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLCF1Q9UBD9 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.77□□□□□ -0.05
CLCF1Q9UBD9 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLCF1Q9UBD9 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLCF1Q9UBD9 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLCF1Q9UBD9 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.77□□□□□ -0.05
CLCF1Q9UBD9 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 AC020916.1-201ENST00000587762 1774 ntBASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 PRYP6-201ENST00000514804 343 ntBASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 ALG1L8P-201ENST00000533887 760 ntBASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 AC051619.7-201ENST00000568314 623 ntBASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 AC106820.2-201ENST00000563775 3264 ntBASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLCF1Q9UBD9 AP001094.4-201ENST00000579008 2176 ntBASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 MIR770-201ENST00000390219 98 ntBASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 SPDYE7P-202ENST00000420373 878 ntBASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms