Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
MKS1Q9NXB0 NKAPP1-205ENST00000585790 367 ntBASIC16.43■□□□□ 0.22
MKS1Q9NXB0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.43■□□□□ 0.22
MKS1Q9NXB0 NPAP1P7-201ENST00000613027 823 ntBASIC16.43■□□□□ 0.22
MKS1Q9NXB0 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.43■□□□□ 0.22
MKS1Q9NXB0 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MKS1Q9NXB0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.43■□□□□ 0.22
MKS1Q9NXB0 AC004706.3-202ENST00000621574 984 ntBASIC16.43■□□□□ 0.22
MKS1Q9NXB0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.43■□□□□ 0.22
MKS1Q9NXB0 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.43■□□□□ 0.22
MKS1Q9NXB0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MKS1Q9NXB0 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MKS1Q9NXB0 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MKS1Q9NXB0 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MKS1Q9NXB0 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.43■□□□□ 0.22
MKS1Q9NXB0 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
MKS1Q9NXB0 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MKS1Q9NXB0 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.43■□□□□ 0.22
MKS1Q9NXB0 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
MKS1Q9NXB0 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.43■□□□□ 0.22
MKS1Q9NXB0 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
MKS1Q9NXB0 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.43■□□□□ 0.22
MKS1Q9NXB0 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.43■□□□□ 0.22
MKS1Q9NXB0 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
MKS1Q9NXB0 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MKS1Q9NXB0 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
MKS1Q9NXB0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 AC013268.4-201ENST00000637413 2228 ntBASIC16.42■□□□□ 0.22
MKS1Q9NXB0 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 HCG4-201ENST00000418983 998 ntBASIC16.42■□□□□ 0.22
MKS1Q9NXB0 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 KRT16P4-201ENST00000453883 522 ntBASIC16.42■□□□□ 0.22
MKS1Q9NXB0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 AP001350.2-201ENST00000625104 1094 ntBASIC16.42■□□□□ 0.22
MKS1Q9NXB0 AL805961.1-202ENST00000641562 540 ntBASIC16.42■□□□□ 0.22
MKS1Q9NXB0 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
MKS1Q9NXB0 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.41■□□□□ 0.22
MKS1Q9NXB0 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.41■□□□□ 0.22
MKS1Q9NXB0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MKS1Q9NXB0 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MKS1Q9NXB0 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.41■□□□□ 0.22
MKS1Q9NXB0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
MKS1Q9NXB0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
MKS1Q9NXB0 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.41■□□□□ 0.22
MKS1Q9NXB0 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MKS1Q9NXB0 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
MKS1Q9NXB0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MKS1Q9NXB0 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MKS1Q9NXB0 PCED1CP-201ENST00000419887 785 ntBASIC16.41■□□□□ 0.22
MKS1Q9NXB0 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
MKS1Q9NXB0 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.41■□□□□ 0.22
MKS1Q9NXB0 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.41■□□□□ 0.22
MKS1Q9NXB0 AC139887.3-201ENST00000568585 713 ntBASIC16.41■□□□□ 0.22
MKS1Q9NXB0 AC005412.3-201ENST00000580309 715 ntBASIC16.41■□□□□ 0.22
MKS1Q9NXB0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MKS1Q9NXB0 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
MKS1Q9NXB0 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.41■□□□□ 0.22
MKS1Q9NXB0 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
MKS1Q9NXB0 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MKS1Q9NXB0 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.41■□□□□ 0.22
MKS1Q9NXB0 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
MKS1Q9NXB0 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms