Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 AF238378.1-201ENST00000526806 358 ntBASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 AL121912.1-201ENST00000603683 238 ntBASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 ME2P1-201ENST00000426028 1970 ntBASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 FGFR3P6-201ENST00000457012 610 ntBASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 ALOX12P2-203ENST00000570921 1945 ntBASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LIN7CQ9NUP9 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms