Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 AC124283.5-201ENST00000624661 1809 ntBASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 SP100-208ENST00000427101 1922 ntTSL 2 BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 GSN-209ENST00000449733 2702 ntTSL 2 BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 AC019294.4-201ENST00000561777 2905 ntBASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 FXN-202ENST00000396364 980 ntTSL 5 BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 METRNL-202ENST00000570778 967 ntTSL 5 BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 AC004899.2-201ENST00000622993 3860 ntBASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 CELP-203ENST00000624767 2414 ntTSL 5 BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 HES6-205ENST00000409356 528 ntTSL 2 BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 AC087393.1-201ENST00000582896 145 ntBASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 AL451085.2-201ENST00000605085 799 ntBASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 ZFHX2-202ENST00000419474 9182 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms