Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
KRCC1Q9NPI7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.33■□□□□ 0.04
KRCC1Q9NPI7 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRCC1Q9NPI7 AC092364.2-201ENST00000596710 2692 ntBASIC15.33■□□□□ 0.04
KRCC1Q9NPI7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.33■□□□□ 0.04
KRCC1Q9NPI7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
KRCC1Q9NPI7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRCC1Q9NPI7 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.33■□□□□ 0.04
KRCC1Q9NPI7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.33■□□□□ 0.04
KRCC1Q9NPI7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRCC1Q9NPI7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KRCC1Q9NPI7 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 RBM17P3-201ENST00000417687 1192 ntBASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 AL139424.1-201ENST00000607572 797 ntBASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 GGT3P-204ENST00000453783 1664 ntBASIC15.32■□□□□ 0.04
KRCC1Q9NPI7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 BX005266.1-201ENST00000473402 457 ntBASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 MIR3180-1-201ENST00000580374 94 ntBASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 MIR3180-3-201ENST00000584616 94 ntBASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 OR2I1P-209ENST00000641730 5365 ntBASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 PCDHA1-201ENST00000378133 2726 ntBASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
KRCC1Q9NPI7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms