Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CD248Q9HCU0 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CD248Q9HCU0 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CD248Q9HCU0 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CD248Q9HCU0 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD248Q9HCU0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.57■□□□□ 0.4
CD248Q9HCU0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD248Q9HCU0 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD248Q9HCU0 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.57■□□□□ 0.4
CD248Q9HCU0 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CD248Q9HCU0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CD248Q9HCU0 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.57■□□□□ 0.4
CD248Q9HCU0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.57■□□□□ 0.4
CD248Q9HCU0 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CD248Q9HCU0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CD248Q9HCU0 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CD248Q9HCU0 HMGN1P19-201ENST00000436976 333 ntBASIC17.57■□□□□ 0.4
CD248Q9HCU0 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CD248Q9HCU0 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.57■□□□□ 0.4
CD248Q9HCU0 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.57■□□□□ 0.4
CD248Q9HCU0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.57■□□□□ 0.4
CD248Q9HCU0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.57■□□□□ 0.4
CD248Q9HCU0 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.57■□□□□ 0.4
CD248Q9HCU0 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CD248Q9HCU0 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CD248Q9HCU0 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD248Q9HCU0 AC022188.1-201ENST00000620960 1664 ntBASIC17.57■□□□□ 0.4
CD248Q9HCU0 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CD248Q9HCU0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD248Q9HCU0 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.57■□□□□ 0.4
CD248Q9HCU0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CD248Q9HCU0 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD248Q9HCU0 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CD248Q9HCU0 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD248Q9HCU0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD248Q9HCU0 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD248Q9HCU0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.56■□□□□ 0.4
CD248Q9HCU0 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CD248Q9HCU0 AL355312.1-201ENST00000407115 2176 ntBASIC17.56■□□□□ 0.4
CD248Q9HCU0 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD248Q9HCU0 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.56■□□□□ 0.4
CD248Q9HCU0 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD248Q9HCU0 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CD248Q9HCU0 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CD248Q9HCU0 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CD248Q9HCU0 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.56■□□□□ 0.4
CD248Q9HCU0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.56■□□□□ 0.4
CD248Q9HCU0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CD248Q9HCU0 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD248Q9HCU0 AP002414.1-201ENST00000391405 1147 ntBASIC17.56■□□□□ 0.4
CD248Q9HCU0 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.56■□□□□ 0.4
CD248Q9HCU0 LINC00982-205ENST00000420957 435 ntBASIC17.56■□□□□ 0.4
CD248Q9HCU0 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.56■□□□□ 0.4
CD248Q9HCU0 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.56■□□□□ 0.4
CD248Q9HCU0 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.56■□□□□ 0.4
CD248Q9HCU0 AC010654.1-201ENST00000615722 808 ntBASIC17.56■□□□□ 0.4
CD248Q9HCU0 C20orf181-201ENST00000623918 480 ntBASIC17.56■□□□□ 0.4
CD248Q9HCU0 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD248Q9HCU0 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD248Q9HCU0 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
CD248Q9HCU0 AC097637.2-201ENST00000624096 1997 ntBASIC17.56■□□□□ 0.4
CD248Q9HCU0 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.56■□□□□ 0.4
CD248Q9HCU0 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CD248Q9HCU0 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CD248Q9HCU0 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD248Q9HCU0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CD248Q9HCU0 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD248Q9HCU0 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD248Q9HCU0 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.56■□□□□ 0.4
CD248Q9HCU0 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CD248Q9HCU0 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CD248Q9HCU0 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD248Q9HCU0 AC006449.5-201ENST00000610658 2098 ntBASIC17.56■□□□□ 0.4
CD248Q9HCU0 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD248Q9HCU0 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD248Q9HCU0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CD248Q9HCU0 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.55■□□□□ 0.4
CD248Q9HCU0 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD248Q9HCU0 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.55■□□□□ 0.4
CD248Q9HCU0 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CD248Q9HCU0 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD248Q9HCU0 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD248Q9HCU0 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CD248Q9HCU0 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CD248Q9HCU0 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CD248Q9HCU0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.55■□□□□ 0.4
CD248Q9HCU0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD248Q9HCU0 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CD248Q9HCU0 IGHV3-52-201ENST00000519770 353 ntBASIC17.55■□□□□ 0.4
CD248Q9HCU0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.55■□□□□ 0.4
CD248Q9HCU0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.55■□□□□ 0.4
CD248Q9HCU0 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD248Q9HCU0 AC027796.2-201ENST00000575326 344 ntBASIC17.55■□□□□ 0.4
CD248Q9HCU0 MIR4469-201ENST00000583919 79 ntBASIC17.55■□□□□ 0.4
CD248Q9HCU0 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CD248Q9HCU0 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.55■□□□□ 0.4
CD248Q9HCU0 AL355385.1-201ENST00000606123 409 ntBASIC17.55■□□□□ 0.4
CD248Q9HCU0 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.55■□□□□ 0.4
CD248Q9HCU0 AC010507.1-201ENST00000633895 436 ntBASIC17.55■□□□□ 0.4
CD248Q9HCU0 AC144831.1-201ENST00000573312 2656 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms