Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 SLC22A20-204ENST00000530038 1673 ntBASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 AL353732.1-201ENST00000569618 1459 ntBASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 RPS15P9-201ENST00000494093 319 ntBASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 AC107918.2-201ENST00000530817 355 ntBASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 GGTLC5P-201ENST00000617623 998 ntBASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRTM1Q9HBL6 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRTM1Q9HBL6 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRTM1Q9HBL6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRTM1Q9HBL6 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRTM1Q9HBL6 AL596087.1-201ENST00000400979 1969 ntBASIC16.02■□□□□ 0.16
LRTM1Q9HBL6 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRTM1Q9HBL6 AC008894.3-201ENST00000624324 3103 ntBASIC16.02■□□□□ 0.16
LRTM1Q9HBL6 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRTM1Q9HBL6 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRTM1Q9HBL6 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRTM1Q9HBL6 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRTM1Q9HBL6 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRTM1Q9HBL6 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.02■□□□□ 0.16
LRTM1Q9HBL6 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRTM1Q9HBL6 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRTM1Q9HBL6 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.02■□□□□ 0.16
LRTM1Q9HBL6 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRTM1Q9HBL6 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRTM1Q9HBL6 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.02■□□□□ 0.16
LRTM1Q9HBL6 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.02■□□□□ 0.16
LRTM1Q9HBL6 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.02■□□□□ 0.16
LRTM1Q9HBL6 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.02■□□□□ 0.16
LRTM1Q9HBL6 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.02■□□□□ 0.16
LRTM1Q9HBL6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.02■□□□□ 0.16
LRTM1Q9HBL6 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
LRTM1Q9HBL6 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.02■□□□□ 0.16
LRTM1Q9HBL6 AP001350.2-201ENST00000625104 1094 ntBASIC16.02■□□□□ 0.16
LRTM1Q9HBL6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.02■□□□□ 0.16
LRTM1Q9HBL6 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRTM1Q9HBL6 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.02■□□□□ 0.16
LRTM1Q9HBL6 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRTM1Q9HBL6 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.02■□□□□ 0.15
LRTM1Q9HBL6 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRTM1Q9HBL6 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRTM1Q9HBL6 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
LRTM1Q9HBL6 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRTM1Q9HBL6 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRTM1Q9HBL6 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRTM1Q9HBL6 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
LRTM1Q9HBL6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms