Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 AC091304.2-201ENST00000564639 760 ntBASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 NKAPP1-205ENST00000585790 367 ntBASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 MTDHP3-201ENST00000594186 672 ntBASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 AC012313.10-201ENST00000623509 926 ntBASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 RBM17P3-201ENST00000417687 1192 ntBASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRDL1Q9BU40 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 RNF216P1-203ENST00000404404 2427 ntBASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms