Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 LINC02560-201ENST00000596379 459 ntBASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 AC006538.1-201ENST00000567905 1585 ntBASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 MTND6P24-201ENST00000440466 518 ntBASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PAAF1Q9BRP4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PAAF1Q9BRP4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PAAF1Q9BRP4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PAAF1Q9BRP4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PAAF1Q9BRP4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PAAF1Q9BRP4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PAAF1Q9BRP4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PAAF1Q9BRP4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PAAF1Q9BRP4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PAAF1Q9BRP4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PAAF1Q9BRP4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PAAF1Q9BRP4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PAAF1Q9BRP4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PAAF1Q9BRP4 AL353705.2-201ENST00000428243 662 ntBASIC17.61■□□□□ 0.41
PAAF1Q9BRP4 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.61■□□□□ 0.41
PAAF1Q9BRP4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PAAF1Q9BRP4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PAAF1Q9BRP4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.61■□□□□ 0.41
PAAF1Q9BRP4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.61■□□□□ 0.41
PAAF1Q9BRP4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.61■□□□□ 0.41
PAAF1Q9BRP4 RN7SL828P-201ENST00000607615 303 ntBASIC17.61■□□□□ 0.41
PAAF1Q9BRP4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.61■□□□□ 0.41
PAAF1Q9BRP4 AC008761.3-201ENST00000624803 892 ntBASIC17.61■□□□□ 0.41
PAAF1Q9BRP4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PAAF1Q9BRP4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.61■□□□□ 0.41
PAAF1Q9BRP4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
PAAF1Q9BRP4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PAAF1Q9BRP4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PAAF1Q9BRP4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms