Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
BPIFA3Q9BQP9 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BPIFA3Q9BQP9 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.4■□□□□ 0.54
BPIFA3Q9BQP9 AC087641.1-201ENST00000557561 1021 ntBASIC18.4■□□□□ 0.54
BPIFA3Q9BQP9 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.4■□□□□ 0.54
BPIFA3Q9BQP9 AC139887.3-201ENST00000568585 713 ntBASIC18.4■□□□□ 0.54
BPIFA3Q9BQP9 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
BPIFA3Q9BQP9 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.4■□□□□ 0.54
BPIFA3Q9BQP9 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BPIFA3Q9BQP9 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BPIFA3Q9BQP9 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.4■□□□□ 0.54
BPIFA3Q9BQP9 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BPIFA3Q9BQP9 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
BPIFA3Q9BQP9 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BPIFA3Q9BQP9 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
BPIFA3Q9BQP9 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
BPIFA3Q9BQP9 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
BPIFA3Q9BQP9 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
BPIFA3Q9BQP9 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.4■□□□□ 0.54
BPIFA3Q9BQP9 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
BPIFA3Q9BQP9 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.39■□□□□ 0.54
BPIFA3Q9BQP9 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
BPIFA3Q9BQP9 AC073347.1-201ENST00000421633 2643 ntBASIC18.39■□□□□ 0.54
BPIFA3Q9BQP9 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.39■□□□□ 0.54
BPIFA3Q9BQP9 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 AP001350.2-201ENST00000625104 1094 ntBASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
BPIFA3Q9BQP9 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 AC006058.4-201ENST00000624016 1670 ntBASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 AC005412.3-201ENST00000580309 715 ntBASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 AL805961.1-202ENST00000641562 540 ntBASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 AC144831.1-201ENST00000573312 2656 ntBASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 HYMAI-201ENST00000635591 3347 ntBASIC18.38■□□□□ 0.53
BPIFA3Q9BQP9 PI4KAP1-204ENST00000612579 1703 ntBASIC18.37■□□□□ 0.53
BPIFA3Q9BQP9 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.37■□□□□ 0.53
BPIFA3Q9BQP9 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms