Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.95□□□□□ -0.18
CCL13Q99616 AL139011.1-202ENST00000642063 584 ntBASIC13.95□□□□□ -0.18
CCL13Q99616 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CCL13Q99616 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.95□□□□□ -0.18
CCL13Q99616 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL13Q99616 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CCL13Q99616 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.95□□□□□ -0.18
CCL13Q99616 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL13Q99616 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.95□□□□□ -0.18
CCL13Q99616 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL13Q99616 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CCL13Q99616 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CCL13Q99616 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.95□□□□□ -0.18
CCL13Q99616 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.95□□□□□ -0.18
CCL13Q99616 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
CCL13Q99616 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.95□□□□□ -0.18
CCL13Q99616 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.95□□□□□ -0.18
CCL13Q99616 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL13Q99616 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL13Q99616 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
CCL13Q99616 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL13Q99616 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC13.95□□□□□ -0.18
CCL13Q99616 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CCL13Q99616 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL13Q99616 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCL13Q99616 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCL13Q99616 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.95□□□□□ -0.18
CCL13Q99616 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
CCL13Q99616 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL13Q99616 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL13Q99616 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL13Q99616 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL13Q99616 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL13Q99616 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CCL13Q99616 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CCL13Q99616 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL13Q99616 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL13Q99616 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL13Q99616 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL13Q99616 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL13Q99616 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL13Q99616 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL13Q99616 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CCL13Q99616 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CCL13Q99616 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL13Q99616 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL13Q99616 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.94□□□□□ -0.18
CCL13Q99616 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL13Q99616 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.94□□□□□ -0.18
CCL13Q99616 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.94□□□□□ -0.18
CCL13Q99616 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.94□□□□□ -0.18
CCL13Q99616 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL13Q99616 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
CCL13Q99616 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL13Q99616 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.94□□□□□ -0.18
CCL13Q99616 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL13Q99616 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.94□□□□□ -0.18
CCL13Q99616 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CCL13Q99616 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL13Q99616 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL13Q99616 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL13Q99616 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL13Q99616 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CCL13Q99616 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
CCL13Q99616 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL13Q99616 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.93□□□□□ -0.18
CCL13Q99616 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL13Q99616 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CCL13Q99616 AL512652.2-201ENST00000625156 1716 ntBASIC13.93□□□□□ -0.18
CCL13Q99616 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL13Q99616 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL13Q99616 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.93□□□□□ -0.18
CCL13Q99616 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL13Q99616 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL13Q99616 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL13Q99616 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL13Q99616 YBX2P1-201ENST00000394192 760 ntBASIC13.93□□□□□ -0.18
CCL13Q99616 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.93□□□□□ -0.18
CCL13Q99616 AC004832.2-201ENST00000426397 482 ntBASIC13.93□□□□□ -0.18
CCL13Q99616 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.93□□□□□ -0.18
CCL13Q99616 AC140658.5-201ENST00000438532 169 ntBASIC13.93□□□□□ -0.18
CCL13Q99616 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.93□□□□□ -0.18
CCL13Q99616 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.93□□□□□ -0.18
CCL13Q99616 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.93□□□□□ -0.18
CCL13Q99616 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.93□□□□□ -0.18
CCL13Q99616 AC092865.5-201ENST00000545435 363 ntBASIC13.93□□□□□ -0.18
CCL13Q99616 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.93□□□□□ -0.18
CCL13Q99616 AP002472.1-201ENST00000577490 586 ntBASIC13.93□□□□□ -0.18
CCL13Q99616 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.93□□□□□ -0.18
CCL13Q99616 MTDHP5-201ENST00000598980 586 ntBASIC13.93□□□□□ -0.18
CCL13Q99616 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.93□□□□□ -0.18
CCL13Q99616 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.93□□□□□ -0.18
CCL13Q99616 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL13Q99616 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CCL13Q99616 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL13Q99616 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL13Q99616 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL13Q99616 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL13Q99616 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL13Q99616 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms