Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDK5RAP2Q96SN8 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CDK5RAP2Q96SN8 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDK5RAP2Q96SN8 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDK5RAP2Q96SN8 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CDK5RAP2Q96SN8 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDK5RAP2Q96SN8 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK5RAP2Q96SN8 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK5RAP2Q96SN8 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.29■□□□□ 0.68
CDK5RAP2Q96SN8 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.29■□□□□ 0.68
CDK5RAP2Q96SN8 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.29■□□□□ 0.68
CDK5RAP2Q96SN8 AC044860.1-202ENST00000559481 777 ntBASIC19.29■□□□□ 0.68
CDK5RAP2Q96SN8 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK5RAP2Q96SN8 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.29■□□□□ 0.68
CDK5RAP2Q96SN8 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDK5RAP2Q96SN8 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.29■□□□□ 0.68
CDK5RAP2Q96SN8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
CDK5RAP2Q96SN8 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CDK5RAP2Q96SN8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.29■□□□□ 0.68
CDK5RAP2Q96SN8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK5RAP2Q96SN8 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK5RAP2Q96SN8 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CDK5RAP2Q96SN8 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK5RAP2Q96SN8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK5RAP2Q96SN8 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CDK5RAP2Q96SN8 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK5RAP2Q96SN8 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDK5RAP2Q96SN8 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK5RAP2Q96SN8 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 RAB35-202ENST00000534951 939 ntTSL 2 BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 CDK4-206ENST00000549606 558 ntTSL 2 BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 U82695.1-201ENST00000635752 1889 ntBASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 AC092171.3-201ENST00000610122 2651 ntBASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 AL391069.4-201ENST00000609583 481 ntBASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 AC011676.5-201ENST00000624864 2660 ntBASIC19.28■□□□□ 0.68
CDK5RAP2Q96SN8 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC19.27■□□□□ 0.68
CDK5RAP2Q96SN8 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.27■□□□□ 0.68
CDK5RAP2Q96SN8 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.27■□□□□ 0.68
CDK5RAP2Q96SN8 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDK5RAP2Q96SN8 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.27■□□□□ 0.68
CDK5RAP2Q96SN8 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDK5RAP2Q96SN8 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDK5RAP2Q96SN8 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
CDK5RAP2Q96SN8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.27■□□□□ 0.68
CDK5RAP2Q96SN8 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDK5RAP2Q96SN8 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDK5RAP2Q96SN8 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDK5RAP2Q96SN8 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
CDK5RAP2Q96SN8 COX5BP8-201ENST00000416911 349 ntBASIC19.27■□□□□ 0.68
CDK5RAP2Q96SN8 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDK5RAP2Q96SN8 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19.27■□□□□ 0.68
CDK5RAP2Q96SN8 RN7SL618P-201ENST00000477850 296 ntBASIC19.27■□□□□ 0.68
CDK5RAP2Q96SN8 AC140912.1-201ENST00000577171 1054 ntBASIC19.27■□□□□ 0.68
CDK5RAP2Q96SN8 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDK5RAP2Q96SN8 AF228730.6-201ENST00000641497 218 ntBASIC19.27■□□□□ 0.68
CDK5RAP2Q96SN8 AC084121.3-201ENST00000641716 218 ntBASIC19.27■□□□□ 0.68
CDK5RAP2Q96SN8 AC105233.6-201ENST00000642093 218 ntBASIC19.27■□□□□ 0.68
CDK5RAP2Q96SN8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CDK5RAP2Q96SN8 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.27■□□□□ 0.68
CDK5RAP2Q96SN8 AC005052.1-201ENST00000625181 2492 ntBASIC19.27■□□□□ 0.68
CDK5RAP2Q96SN8 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CDK5RAP2Q96SN8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDK5RAP2Q96SN8 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDK5RAP2Q96SN8 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms