Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.81■□□□□ 0.12
BBS4Q96RK4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
BBS4Q96RK4 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
BBS4Q96RK4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BBS4Q96RK4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BBS4Q96RK4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.81■□□□□ 0.12
BBS4Q96RK4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
BBS4Q96RK4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BBS4Q96RK4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.81■□□□□ 0.12
BBS4Q96RK4 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
BBS4Q96RK4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.81■□□□□ 0.12
BBS4Q96RK4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
BBS4Q96RK4 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.81■□□□□ 0.12
BBS4Q96RK4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BBS4Q96RK4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BBS4Q96RK4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
BBS4Q96RK4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BBS4Q96RK4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.81■□□□□ 0.12
BBS4Q96RK4 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
BBS4Q96RK4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.81■□□□□ 0.12
BBS4Q96RK4 AL662844.1-201ENST00000546340 181 ntBASIC15.81■□□□□ 0.12
BBS4Q96RK4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.81■□□□□ 0.12
BBS4Q96RK4 AC087641.1-201ENST00000557561 1021 ntBASIC15.81■□□□□ 0.12
BBS4Q96RK4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.81■□□□□ 0.12
BBS4Q96RK4 AP001005.1-201ENST00000571755 1248 ntBASIC15.81■□□□□ 0.12
BBS4Q96RK4 MIR4751-201ENST00000578027 74 ntBASIC15.81■□□□□ 0.12
BBS4Q96RK4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BBS4Q96RK4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.81■□□□□ 0.12
BBS4Q96RK4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.81■□□□□ 0.12
BBS4Q96RK4 AL049840.3-201ENST00000602669 611 ntBASIC15.81■□□□□ 0.12
BBS4Q96RK4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
BBS4Q96RK4 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BBS4Q96RK4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BBS4Q96RK4 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BBS4Q96RK4 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
BBS4Q96RK4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BBS4Q96RK4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
BBS4Q96RK4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
BBS4Q96RK4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BBS4Q96RK4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BBS4Q96RK4 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
BBS4Q96RK4 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BBS4Q96RK4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BBS4Q96RK4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BBS4Q96RK4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BBS4Q96RK4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
BBS4Q96RK4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BBS4Q96RK4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.8■□□□□ 0.12
BBS4Q96RK4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.8■□□□□ 0.12
BBS4Q96RK4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.8■□□□□ 0.12
BBS4Q96RK4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.8■□□□□ 0.12
BBS4Q96RK4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BBS4Q96RK4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.8■□□□□ 0.12
BBS4Q96RK4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
BBS4Q96RK4 MRPL3P1-201ENST00000400109 1033 ntBASIC15.8■□□□□ 0.12
BBS4Q96RK4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BBS4Q96RK4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
BBS4Q96RK4 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.8■□□□□ 0.12
BBS4Q96RK4 HCG4-201ENST00000418983 998 ntBASIC15.8■□□□□ 0.12
BBS4Q96RK4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
BBS4Q96RK4 AC098831.1-202ENST00000438821 336 ntBASIC15.8■□□□□ 0.12
BBS4Q96RK4 AC108751.1-201ENST00000490852 363 ntBASIC15.8■□□□□ 0.12
BBS4Q96RK4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.8■□□□□ 0.12
BBS4Q96RK4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
BBS4Q96RK4 CYP2A7P1-201ENST00000595391 815 ntBASIC15.8■□□□□ 0.12
BBS4Q96RK4 MIR7706-201ENST00000613747 67 ntBASIC15.8■□□□□ 0.12
BBS4Q96RK4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
BBS4Q96RK4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BBS4Q96RK4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BBS4Q96RK4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BBS4Q96RK4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.8■□□□□ 0.12
BBS4Q96RK4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.8■□□□□ 0.12
BBS4Q96RK4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.8■□□□□ 0.12
BBS4Q96RK4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BBS4Q96RK4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
BBS4Q96RK4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BBS4Q96RK4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BBS4Q96RK4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
BBS4Q96RK4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
BBS4Q96RK4 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BBS4Q96RK4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BBS4Q96RK4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.8■□□□□ 0.12
BBS4Q96RK4 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BBS4Q96RK4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BBS4Q96RK4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BBS4Q96RK4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.8■□□□□ 0.12
BBS4Q96RK4 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BBS4Q96RK4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BBS4Q96RK4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BBS4Q96RK4 SLC22A20-204ENST00000530038 1673 ntBASIC15.79■□□□□ 0.12
BBS4Q96RK4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BBS4Q96RK4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BBS4Q96RK4 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BBS4Q96RK4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BBS4Q96RK4 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.79■□□□□ 0.12
BBS4Q96RK4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.79■□□□□ 0.12
BBS4Q96RK4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BBS4Q96RK4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.79■□□□□ 0.12
BBS4Q96RK4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
BBS4Q96RK4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms