Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
COL21A1Q96P44 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.79■□□□□ 0.12
COL21A1Q96P44 AC116407.3-201ENST00000623905 1129 ntBASIC15.79■□□□□ 0.12
COL21A1Q96P44 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.79■□□□□ 0.12
COL21A1Q96P44 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.79■□□□□ 0.12
COL21A1Q96P44 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL21A1Q96P44 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL21A1Q96P44 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
COL21A1Q96P44 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.79■□□□□ 0.12
COL21A1Q96P44 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL21A1Q96P44 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
COL21A1Q96P44 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL21A1Q96P44 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
COL21A1Q96P44 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL21A1Q96P44 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.79■□□□□ 0.12
COL21A1Q96P44 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL21A1Q96P44 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
COL21A1Q96P44 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COL21A1Q96P44 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COL21A1Q96P44 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COL21A1Q96P44 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COL21A1Q96P44 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
COL21A1Q96P44 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
COL21A1Q96P44 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
COL21A1Q96P44 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.78■□□□□ 0.12
COL21A1Q96P44 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COL21A1Q96P44 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.78■□□□□ 0.12
COL21A1Q96P44 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.78■□□□□ 0.12
COL21A1Q96P44 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COL21A1Q96P44 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.78■□□□□ 0.12
COL21A1Q96P44 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL21A1Q96P44 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COL21A1Q96P44 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL21A1Q96P44 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
COL21A1Q96P44 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COL21A1Q96P44 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL21A1Q96P44 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.78■□□□□ 0.12
COL21A1Q96P44 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.78■□□□□ 0.12
COL21A1Q96P44 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
COL21A1Q96P44 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
COL21A1Q96P44 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COL21A1Q96P44 AC103702.1-201ENST00000548801 2630 ntBASIC15.78■□□□□ 0.12
COL21A1Q96P44 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
COL21A1Q96P44 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.78■□□□□ 0.12
COL21A1Q96P44 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COL21A1Q96P44 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.78■□□□□ 0.12
COL21A1Q96P44 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.78■□□□□ 0.12
COL21A1Q96P44 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.77■□□□□ 0.12
COL21A1Q96P44 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
COL21A1Q96P44 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
COL21A1Q96P44 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.77■□□□□ 0.12
COL21A1Q96P44 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
COL21A1Q96P44 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
COL21A1Q96P44 AC243591.1-201ENST00000452967 1364 ntBASIC15.77■□□□□ 0.12
COL21A1Q96P44 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.77■□□□□ 0.12
COL21A1Q96P44 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
COL21A1Q96P44 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COL21A1Q96P44 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COL21A1Q96P44 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.77■□□□□ 0.12
COL21A1Q96P44 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
COL21A1Q96P44 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.77■□□□□ 0.12
COL21A1Q96P44 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
COL21A1Q96P44 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
COL21A1Q96P44 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COL21A1Q96P44 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.77■□□□□ 0.12
COL21A1Q96P44 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.77■□□□□ 0.12
COL21A1Q96P44 AC098831.1-202ENST00000438821 336 ntBASIC15.77■□□□□ 0.12
COL21A1Q96P44 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.77■□□□□ 0.12
COL21A1Q96P44 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.77■□□□□ 0.12
COL21A1Q96P44 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
COL21A1Q96P44 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COL21A1Q96P44 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.77■□□□□ 0.12
COL21A1Q96P44 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
COL21A1Q96P44 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
COL21A1Q96P44 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
COL21A1Q96P44 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
COL21A1Q96P44 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COL21A1Q96P44 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
COL21A1Q96P44 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
COL21A1Q96P44 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.11
COL21A1Q96P44 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COL21A1Q96P44 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
COL21A1Q96P44 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COL21A1Q96P44 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COL21A1Q96P44 PI4KAP1-204ENST00000612579 1703 ntBASIC15.77■□□□□ 0.11
COL21A1Q96P44 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
COL21A1Q96P44 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
COL21A1Q96P44 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL21A1Q96P44 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
COL21A1Q96P44 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL21A1Q96P44 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL21A1Q96P44 MST1L-201ENST00000442552 2185 ntBASIC15.76■□□□□ 0.11
COL21A1Q96P44 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.76■□□□□ 0.11
COL21A1Q96P44 AL513477.1-201ENST00000602865 2407 ntBASIC15.76■□□□□ 0.11
COL21A1Q96P44 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.76■□□□□ 0.11
COL21A1Q96P44 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL21A1Q96P44 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.76■□□□□ 0.11
COL21A1Q96P44 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL21A1Q96P44 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL21A1Q96P44 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms