Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.78■□□□□ 0.76
DDX11Q96FC9 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.78■□□□□ 0.76
DDX11Q96FC9 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.78■□□□□ 0.76
DDX11Q96FC9 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.78■□□□□ 0.76
DDX11Q96FC9 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.78■□□□□ 0.76
DDX11Q96FC9 AC023141.13-201ENST00000604991 943 ntBASIC19.78■□□□□ 0.76
DDX11Q96FC9 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
DDX11Q96FC9 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DDX11Q96FC9 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.78■□□□□ 0.76
DDX11Q96FC9 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
DDX11Q96FC9 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.78■□□□□ 0.76
DDX11Q96FC9 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DDX11Q96FC9 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.77■□□□□ 0.76
DDX11Q96FC9 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
DDX11Q96FC9 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
DDX11Q96FC9 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
DDX11Q96FC9 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.77■□□□□ 0.76
DDX11Q96FC9 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
DDX11Q96FC9 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
DDX11Q96FC9 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
DDX11Q96FC9 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.77■□□□□ 0.76
DDX11Q96FC9 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
DDX11Q96FC9 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
DDX11Q96FC9 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
DDX11Q96FC9 AC074386.1-202ENST00000463561 864 ntBASIC19.77■□□□□ 0.76
DDX11Q96FC9 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.77■□□□□ 0.76
DDX11Q96FC9 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.77■□□□□ 0.76
DDX11Q96FC9 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.77■□□□□ 0.76
DDX11Q96FC9 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
DDX11Q96FC9 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
DDX11Q96FC9 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
DDX11Q96FC9 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
DDX11Q96FC9 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
DDX11Q96FC9 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.77■□□□□ 0.76
DDX11Q96FC9 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
DDX11Q96FC9 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
DDX11Q96FC9 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
DDX11Q96FC9 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
DDX11Q96FC9 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
DDX11Q96FC9 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.75
DDX11Q96FC9 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
DDX11Q96FC9 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
DDX11Q96FC9 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DDX11Q96FC9 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
DDX11Q96FC9 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DDX11Q96FC9 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.76■□□□□ 0.75
DDX11Q96FC9 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
DDX11Q96FC9 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
DDX11Q96FC9 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
DDX11Q96FC9 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DDX11Q96FC9 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
DDX11Q96FC9 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
DDX11Q96FC9 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
DDX11Q96FC9 AL021920.2-201ENST00000624828 1351 ntBASIC19.76■□□□□ 0.75
DDX11Q96FC9 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.76■□□□□ 0.75
DDX11Q96FC9 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DDX11Q96FC9 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
DDX11Q96FC9 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.76■□□□□ 0.75
DDX11Q96FC9 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.76■□□□□ 0.75
DDX11Q96FC9 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.76■□□□□ 0.75
DDX11Q96FC9 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.76■□□□□ 0.75
DDX11Q96FC9 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.76■□□□□ 0.75
DDX11Q96FC9 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.76■□□□□ 0.75
DDX11Q96FC9 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.76■□□□□ 0.75
DDX11Q96FC9 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
DDX11Q96FC9 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
DDX11Q96FC9 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DDX11Q96FC9 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
DDX11Q96FC9 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.76■□□□□ 0.75
DDX11Q96FC9 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DDX11Q96FC9 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DDX11Q96FC9 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
DDX11Q96FC9 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.75■□□□□ 0.75
DDX11Q96FC9 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DDX11Q96FC9 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.75■□□□□ 0.75
DDX11Q96FC9 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
DDX11Q96FC9 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.75■□□□□ 0.75
DDX11Q96FC9 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
DDX11Q96FC9 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX11Q96FC9 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.75■□□□□ 0.75
DDX11Q96FC9 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.75■□□□□ 0.75
DDX11Q96FC9 AC092364.2-201ENST00000596710 2692 ntBASIC19.75■□□□□ 0.75
DDX11Q96FC9 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.75■□□□□ 0.75
DDX11Q96FC9 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.75■□□□□ 0.75
DDX11Q96FC9 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DDX11Q96FC9 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
DDX11Q96FC9 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX11Q96FC9 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX11Q96FC9 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX11Q96FC9 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.75■□□□□ 0.75
DDX11Q96FC9 FAM58CP-201ENST00000435741 640 ntBASIC19.75■□□□□ 0.75
DDX11Q96FC9 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
DDX11Q96FC9 CXCL1P1-201ENST00000502804 216 ntBASIC19.75■□□□□ 0.75
DDX11Q96FC9 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.75■□□□□ 0.75
DDX11Q96FC9 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.75■□□□□ 0.75
DDX11Q96FC9 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.75■□□□□ 0.75
DDX11Q96FC9 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.75■□□□□ 0.75
DDX11Q96FC9 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX11Q96FC9 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
DDX11Q96FC9 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms