Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.14■□□□□ 0.33
HDAC11Q96DB2 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.14■□□□□ 0.33
HDAC11Q96DB2 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
HDAC11Q96DB2 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.14■□□□□ 0.33
HDAC11Q96DB2 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.14■□□□□ 0.33
HDAC11Q96DB2 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC11Q96DB2 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.14■□□□□ 0.33
HDAC11Q96DB2 MIR4515-201ENST00000584082 81 ntBASIC17.14■□□□□ 0.33
HDAC11Q96DB2 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC11Q96DB2 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC11Q96DB2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC11Q96DB2 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.14■□□□□ 0.33
HDAC11Q96DB2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.14■□□□□ 0.33
HDAC11Q96DB2 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC11Q96DB2 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC11Q96DB2 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.14■□□□□ 0.33
HDAC11Q96DB2 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.14■□□□□ 0.33
HDAC11Q96DB2 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC11Q96DB2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC11Q96DB2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.14■□□□□ 0.33
HDAC11Q96DB2 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
HDAC11Q96DB2 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.13■□□□□ 0.33
HDAC11Q96DB2 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC11Q96DB2 AL139384.1-201ENST00000612143 3047 ntBASIC17.13■□□□□ 0.33
HDAC11Q96DB2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC11Q96DB2 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HDAC11Q96DB2 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.13■□□□□ 0.33
HDAC11Q96DB2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC11Q96DB2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC11Q96DB2 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
HDAC11Q96DB2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
HDAC11Q96DB2 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC11Q96DB2 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.13■□□□□ 0.33
HDAC11Q96DB2 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.13■□□□□ 0.33
HDAC11Q96DB2 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.13■□□□□ 0.33
HDAC11Q96DB2 AC034105.1-201ENST00000563488 319 ntBASIC17.13■□□□□ 0.33
HDAC11Q96DB2 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC11Q96DB2 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.13■□□□□ 0.33
HDAC11Q96DB2 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC11Q96DB2 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC11Q96DB2 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HDAC11Q96DB2 IL9RP2-201ENST00000423948 1312 ntBASIC17.13■□□□□ 0.33
HDAC11Q96DB2 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.13■□□□□ 0.33
HDAC11Q96DB2 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC11Q96DB2 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC11Q96DB2 GGT3P-204ENST00000453783 1664 ntBASIC17.13■□□□□ 0.33
HDAC11Q96DB2 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.13■□□□□ 0.33
HDAC11Q96DB2 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC11Q96DB2 GGT4P-201ENST00000623672 1708 ntBASIC17.13■□□□□ 0.33
HDAC11Q96DB2 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC11Q96DB2 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.13■□□□□ 0.33
HDAC11Q96DB2 AC104109.2-201ENST00000602919 1418 ntBASIC17.13■□□□□ 0.33
HDAC11Q96DB2 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 AL031731.1-201ENST00000642131 2094 ntBASIC17.12■□□□□ 0.33
HDAC11Q96DB2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 AC026396.1-201ENST00000419388 421 ntBASIC17.12■□□□□ 0.33
HDAC11Q96DB2 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 AC096734.2-201ENST00000562054 433 ntBASIC17.12■□□□□ 0.33
HDAC11Q96DB2 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 AL645728.2-201ENST00000641974 660 ntBASIC17.12■□□□□ 0.33
HDAC11Q96DB2 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.12■□□□□ 0.33
HDAC11Q96DB2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HDAC11Q96DB2 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms