Protein–RNA interactions for Protein: Q96C34

RUNDC1, RUN domain-containing protein 1, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC1Q96C34 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC21.8■■□□□ 1.08
RUNDC1Q96C34 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RUNDC1Q96C34 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RUNDC1Q96C34 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC21.8■■□□□ 1.08
RUNDC1Q96C34 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
RUNDC1Q96C34 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
RUNDC1Q96C34 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RUNDC1Q96C34 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RUNDC1Q96C34 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RUNDC1Q96C34 AC004461.1-201ENST00000412461 403 ntBASIC21.8■■□□□ 1.08
RUNDC1Q96C34 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC21.8■■□□□ 1.08
RUNDC1Q96C34 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC21.8■■□□□ 1.08
RUNDC1Q96C34 AC004967.1-201ENST00000453589 447 ntBASIC21.8■■□□□ 1.08
RUNDC1Q96C34 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC21.8■■□□□ 1.08
RUNDC1Q96C34 PRYP6-201ENST00000514804 343 ntBASIC21.8■■□□□ 1.08
RUNDC1Q96C34 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC21.8■■□□□ 1.08
RUNDC1Q96C34 RNF34-208ENST00000555076 593 ntTSL 3 BASIC21.8■■□□□ 1.08
RUNDC1Q96C34 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC21.8■■□□□ 1.08
RUNDC1Q96C34 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC21.8■■□□□ 1.08
RUNDC1Q96C34 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC21.8■■□□□ 1.08
RUNDC1Q96C34 SSH2-211ENST00000590153 570 ntTSL 4 BASIC21.8■■□□□ 1.08
RUNDC1Q96C34 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RUNDC1Q96C34 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC21.8■■□□□ 1.08
RUNDC1Q96C34 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RUNDC1Q96C34 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
RUNDC1Q96C34 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RUNDC1Q96C34 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RUNDC1Q96C34 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RUNDC1Q96C34 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RUNDC1Q96C34 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC21.8■■□□□ 1.08
RUNDC1Q96C34 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RUNDC1Q96C34 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RUNDC1Q96C34 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC21.79■■□□□ 1.08
RUNDC1Q96C34 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RUNDC1Q96C34 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
RUNDC1Q96C34 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RUNDC1Q96C34 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC21.79■■□□□ 1.08
RUNDC1Q96C34 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
RUNDC1Q96C34 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC21.79■■□□□ 1.08
RUNDC1Q96C34 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RUNDC1Q96C34 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RUNDC1Q96C34 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RUNDC1Q96C34 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
RUNDC1Q96C34 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RUNDC1Q96C34 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC21.79■■□□□ 1.08
RUNDC1Q96C34 POU5F1P6-201ENST00000466990 990 ntBASIC21.79■■□□□ 1.08
RUNDC1Q96C34 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC21.79■■□□□ 1.08
RUNDC1Q96C34 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
RUNDC1Q96C34 CCND1-203ENST00000536559 553 ntTSL 3 BASIC21.79■■□□□ 1.08
RUNDC1Q96C34 QPRT-203ENST00000562473 579 ntTSL 3 BASIC21.79■■□□□ 1.08
RUNDC1Q96C34 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC21.79■■□□□ 1.08
RUNDC1Q96C34 AC139530.3-201ENST00000620344 690 ntBASIC21.79■■□□□ 1.08
RUNDC1Q96C34 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC21.79■■□□□ 1.08
RUNDC1Q96C34 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC21.79■■□□□ 1.08
RUNDC1Q96C34 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RUNDC1Q96C34 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
RUNDC1Q96C34 AL118508.1-201ENST00000613502 2345 ntBASIC21.79■■□□□ 1.08
RUNDC1Q96C34 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
RUNDC1Q96C34 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC21.79■■□□□ 1.08
RUNDC1Q96C34 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RUNDC1Q96C34 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RUNDC1Q96C34 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RUNDC1Q96C34 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RUNDC1Q96C34 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RUNDC1Q96C34 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RUNDC1Q96C34 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC21.78■■□□□ 1.08
RUNDC1Q96C34 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RUNDC1Q96C34 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RUNDC1Q96C34 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC21.78■■□□□ 1.08
RUNDC1Q96C34 AC005622.1-201ENST00000636801 1703 ntBASIC21.78■■□□□ 1.08
RUNDC1Q96C34 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
RUNDC1Q96C34 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC21.78■■□□□ 1.08
RUNDC1Q96C34 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RUNDC1Q96C34 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC21.78■■□□□ 1.08
RUNDC1Q96C34 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RUNDC1Q96C34 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC21.78■■□□□ 1.08
RUNDC1Q96C34 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RUNDC1Q96C34 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
RUNDC1Q96C34 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC21.78■■□□□ 1.08
RUNDC1Q96C34 AC254562.1-201ENST00000417586 456 ntBASIC21.78■■□□□ 1.08
RUNDC1Q96C34 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
RUNDC1Q96C34 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RUNDC1Q96C34 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC21.78■■□□□ 1.08
RUNDC1Q96C34 AP000344.2-201ENST00000512987 629 ntBASIC21.78■■□□□ 1.08
RUNDC1Q96C34 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC21.78■■□□□ 1.08
RUNDC1Q96C34 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC21.78■■□□□ 1.08
RUNDC1Q96C34 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC21.78■■□□□ 1.08
RUNDC1Q96C34 FOXO1B-201ENST00000504678 1527 ntBASIC21.78■■□□□ 1.08
RUNDC1Q96C34 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC21.78■■□□□ 1.08
RUNDC1Q96C34 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RUNDC1Q96C34 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RUNDC1Q96C34 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC21.78■■□□□ 1.08
RUNDC1Q96C34 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC21.78■■□□□ 1.08
RUNDC1Q96C34 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RUNDC1Q96C34 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RUNDC1Q96C34 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC21.78■■□□□ 1.08
RUNDC1Q96C34 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RUNDC1Q96C34 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC21.77■■□□□ 1.08
RUNDC1Q96C34 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RUNDC1Q96C34 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms