Protein–RNA interactions for Protein: Q96B67

ARRDC3, Arrestin domain-containing protein 3, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3Q96B67 HLA-H-201ENST00000383620 1096 ntBASIC16.52■□□□□ 0.24
ARRDC3Q96B67 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.52■□□□□ 0.24
ARRDC3Q96B67 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.52■□□□□ 0.24
ARRDC3Q96B67 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.52■□□□□ 0.24
ARRDC3Q96B67 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
ARRDC3Q96B67 AC093724.1-201ENST00000448659 1027 ntBASIC16.52■□□□□ 0.24
ARRDC3Q96B67 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.52■□□□□ 0.24
ARRDC3Q96B67 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.52■□□□□ 0.24
ARRDC3Q96B67 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.52■□□□□ 0.24
ARRDC3Q96B67 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.52■□□□□ 0.24
ARRDC3Q96B67 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.52■□□□□ 0.24
ARRDC3Q96B67 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.52■□□□□ 0.24
ARRDC3Q96B67 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ARRDC3Q96B67 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ARRDC3Q96B67 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ARRDC3Q96B67 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ARRDC3Q96B67 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ARRDC3Q96B67 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ARRDC3Q96B67 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
ARRDC3Q96B67 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ARRDC3Q96B67 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
ARRDC3Q96B67 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
ARRDC3Q96B67 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.52■□□□□ 0.23
ARRDC3Q96B67 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
ARRDC3Q96B67 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ARRDC3Q96B67 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
ARRDC3Q96B67 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
ARRDC3Q96B67 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ARRDC3Q96B67 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.52■□□□□ 0.23
ARRDC3Q96B67 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
ARRDC3Q96B67 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ARRDC3Q96B67 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.52■□□□□ 0.23
ARRDC3Q96B67 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ARRDC3Q96B67 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 FAM220BP-201ENST00000377689 816 ntBASIC16.51■□□□□ 0.23
ARRDC3Q96B67 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 AC098859.1-201ENST00000502915 1238 ntBASIC16.51■□□□□ 0.23
ARRDC3Q96B67 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 AL096865.1-201ENST00000606796 927 ntBASIC16.51■□□□□ 0.23
ARRDC3Q96B67 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ARRDC3Q96B67 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ARRDC3Q96B67 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARRDC3Q96B67 HLA-A-202ENST00000376806 1854 ntBASIC16.5■□□□□ 0.23
ARRDC3Q96B67 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.5■□□□□ 0.23
ARRDC3Q96B67 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ARRDC3Q96B67 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARRDC3Q96B67 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARRDC3Q96B67 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARRDC3Q96B67 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARRDC3Q96B67 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ARRDC3Q96B67 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
ARRDC3Q96B67 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
ARRDC3Q96B67 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.5■□□□□ 0.23
ARRDC3Q96B67 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ARRDC3Q96B67 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.5■□□□□ 0.23
ARRDC3Q96B67 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.5■□□□□ 0.23
ARRDC3Q96B67 AC069120.2-201ENST00000524091 540 ntBASIC16.5■□□□□ 0.23
ARRDC3Q96B67 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.5■□□□□ 0.23
ARRDC3Q96B67 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.5■□□□□ 0.23
ARRDC3Q96B67 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.5■□□□□ 0.23
ARRDC3Q96B67 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARRDC3Q96B67 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms