Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC107Q8WV48 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC107Q8WV48 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC107Q8WV48 AC126177.1-201ENST00000547829 2218 ntBASIC14.47□□□□□ -0.09
CCDC107Q8WV48 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 FAM210CP-201ENST00000445714 574 ntBASIC14.47□□□□□ -0.09
CCDC107Q8WV48 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 STK25P1-201ENST00000585406 838 ntBASIC14.47□□□□□ -0.09
CCDC107Q8WV48 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 AC116407.4-201ENST00000623319 1061 ntBASIC14.47□□□□□ -0.09
CCDC107Q8WV48 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CCDC107Q8WV48 IER3-202ENST00000376377 1350 ntBASIC14.47□□□□□ -0.09
CCDC107Q8WV48 AC233702.3-201ENST00000578656 1387 ntBASIC14.47□□□□□ -0.09
CCDC107Q8WV48 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.46□□□□□ -0.09
CCDC107Q8WV48 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CCDC107Q8WV48 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC107Q8WV48 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.46□□□□□ -0.09
CCDC107Q8WV48 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CCDC107Q8WV48 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC107Q8WV48 TP73-AS1-210ENST00000637775 1455 ntBASIC14.46□□□□□ -0.09
CCDC107Q8WV48 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CCDC107Q8WV48 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC107Q8WV48 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.46□□□□□ -0.09
CCDC107Q8WV48 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC107Q8WV48 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC107Q8WV48 LINC00265-3P-201ENST00000447588 903 ntBASIC14.46□□□□□ -0.09
CCDC107Q8WV48 TOB2P1-201ENST00000469761 992 ntBASIC14.46□□□□□ -0.09
CCDC107Q8WV48 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.46□□□□□ -0.09
CCDC107Q8WV48 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.46□□□□□ -0.09
CCDC107Q8WV48 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.46□□□□□ -0.09
CCDC107Q8WV48 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
CCDC107Q8WV48 AP002414.4-201ENST00000589764 1148 ntBASIC14.46□□□□□ -0.09
CCDC107Q8WV48 Z69720.1-201ENST00000601483 472 ntBASIC14.46□□□□□ -0.09
CCDC107Q8WV48 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC107Q8WV48 AL590326.2-201ENST00000625139 305 ntBASIC14.46□□□□□ -0.09
CCDC107Q8WV48 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.46□□□□□ -0.09
CCDC107Q8WV48 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CCDC107Q8WV48 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC107Q8WV48 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.46□□□□□ -0.09
CCDC107Q8WV48 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CCDC107Q8WV48 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC107Q8WV48 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC107Q8WV48 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC107Q8WV48 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC107Q8WV48 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.46□□□□□ -0.1
CCDC107Q8WV48 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.46□□□□□ -0.1
CCDC107Q8WV48 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC107Q8WV48 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC107Q8WV48 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC107Q8WV48 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.46□□□□□ -0.1
CCDC107Q8WV48 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
CCDC107Q8WV48 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC107Q8WV48 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC107Q8WV48 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC107Q8WV48 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC107Q8WV48 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC107Q8WV48 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC107Q8WV48 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC107Q8WV48 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC107Q8WV48 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CCDC107Q8WV48 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC107Q8WV48 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC107Q8WV48 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC107Q8WV48 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC107Q8WV48 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.45□□□□□ -0.1
CCDC107Q8WV48 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC107Q8WV48 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms