Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 GPAA1P2-202ENST00000606848 1787 ntBASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 PDPK2P-202ENST00000562415 1191 ntBASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 AC021097.1-201ENST00000607902 574 ntBASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 AL513190.1-201ENST00000621254 727 ntBASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.05■□□□□ 0.32
ATPAF2Q8N5M1 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 ALOX12P2-203ENST00000570921 1945 ntBASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 PMS2P4-201ENST00000412466 1052 ntBASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 AC068137.2-201ENST00000605408 478 ntBASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms