Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
XRN1Q8IZH2 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
XRN1Q8IZH2 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
XRN1Q8IZH2 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
XRN1Q8IZH2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
XRN1Q8IZH2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
XRN1Q8IZH2 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
XRN1Q8IZH2 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
XRN1Q8IZH2 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
XRN1Q8IZH2 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
XRN1Q8IZH2 AP002490.2-201ENST00000524791 560 ntBASIC22.64■■□□□ 1.21
XRN1Q8IZH2 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC22.64■■□□□ 1.21
XRN1Q8IZH2 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC22.64■■□□□ 1.21
XRN1Q8IZH2 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC22.64■■□□□ 1.21
XRN1Q8IZH2 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
XRN1Q8IZH2 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC22.64■■□□□ 1.21
XRN1Q8IZH2 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC22.64■■□□□ 1.21
XRN1Q8IZH2 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
XRN1Q8IZH2 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC22.64■■□□□ 1.21
XRN1Q8IZH2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
XRN1Q8IZH2 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
XRN1Q8IZH2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC22.63■■□□□ 1.21
XRN1Q8IZH2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC22.63■■□□□ 1.21
XRN1Q8IZH2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
XRN1Q8IZH2 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
XRN1Q8IZH2 AC074338.1-201ENST00000416825 156 ntBASIC22.63■■□□□ 1.21
XRN1Q8IZH2 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
XRN1Q8IZH2 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC22.63■■□□□ 1.21
XRN1Q8IZH2 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
XRN1Q8IZH2 RN7SL219P-201ENST00000582872 296 ntBASIC22.63■■□□□ 1.21
XRN1Q8IZH2 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC22.63■■□□□ 1.21
XRN1Q8IZH2 AL139099.5-201ENST00000635274 300 ntBASIC22.63■■□□□ 1.21
XRN1Q8IZH2 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
XRN1Q8IZH2 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
XRN1Q8IZH2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
XRN1Q8IZH2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
XRN1Q8IZH2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC22.63■■□□□ 1.21
XRN1Q8IZH2 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC22.63■■□□□ 1.21
XRN1Q8IZH2 RPL28-203ENST00000428193 573 ntTSL 2 BASIC22.62■■□□□ 1.21
XRN1Q8IZH2 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC22.62■■□□□ 1.21
XRN1Q8IZH2 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC22.62■■□□□ 1.21
XRN1Q8IZH2 RPL28-207ENST00000558815 616 ntTSL 2 BASIC22.62■■□□□ 1.21
XRN1Q8IZH2 AC009542.2-202ENST00000619004 1067 ntBASIC22.62■■□□□ 1.21
XRN1Q8IZH2 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
XRN1Q8IZH2 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
XRN1Q8IZH2 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC22.62■■□□□ 1.21
XRN1Q8IZH2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC22.62■■□□□ 1.21
XRN1Q8IZH2 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
XRN1Q8IZH2 FAM21FP-201ENST00000426241 1131 ntBASIC22.62■■□□□ 1.21
XRN1Q8IZH2 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
XRN1Q8IZH2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC22.62■■□□□ 1.21
XRN1Q8IZH2 KRT90P-201ENST00000549264 1064 ntBASIC22.62■■□□□ 1.21
XRN1Q8IZH2 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC22.62■■□□□ 1.21
XRN1Q8IZH2 AL365330.1-201ENST00000607459 531 ntBASIC22.62■■□□□ 1.21
XRN1Q8IZH2 AL022328.1-201ENST00000610050 478 ntBASIC22.62■■□□□ 1.21
XRN1Q8IZH2 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC22.62■■□□□ 1.21
XRN1Q8IZH2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
XRN1Q8IZH2 TP73-213ENST00000604479 1623 ntTSL 5 BASIC22.61■■□□□ 1.21
XRN1Q8IZH2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
XRN1Q8IZH2 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
XRN1Q8IZH2 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
XRN1Q8IZH2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
XRN1Q8IZH2 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC22.61■■□□□ 1.21
XRN1Q8IZH2 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
XRN1Q8IZH2 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
XRN1Q8IZH2 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
XRN1Q8IZH2 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC22.61■■□□□ 1.21
XRN1Q8IZH2 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC22.61■■□□□ 1.21
XRN1Q8IZH2 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC22.61■■□□□ 1.21
XRN1Q8IZH2 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC22.61■■□□□ 1.21
XRN1Q8IZH2 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC22.61■■□□□ 1.21
XRN1Q8IZH2 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC22.61■■□□□ 1.21
XRN1Q8IZH2 SLC25A47P1-201ENST00000531577 414 ntBASIC22.61■■□□□ 1.21
XRN1Q8IZH2 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC22.61■■□□□ 1.21
XRN1Q8IZH2 EMC4-209ENST00000559421 497 ntTSL 2 BASIC22.61■■□□□ 1.21
XRN1Q8IZH2 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC22.61■■□□□ 1.21
XRN1Q8IZH2 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
XRN1Q8IZH2 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC22.61■■□□□ 1.21
XRN1Q8IZH2 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
XRN1Q8IZH2 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC22.61■■□□□ 1.21
XRN1Q8IZH2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
XRN1Q8IZH2 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
XRN1Q8IZH2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
XRN1Q8IZH2 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
XRN1Q8IZH2 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
XRN1Q8IZH2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
XRN1Q8IZH2 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
XRN1Q8IZH2 NME6-203ENST00000415644 849 ntTSL 2 BASIC22.6■■□□□ 1.21
XRN1Q8IZH2 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC22.6■■□□□ 1.21
XRN1Q8IZH2 FTH1P14-201ENST00000482930 551 ntBASIC22.6■■□□□ 1.21
XRN1Q8IZH2 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
XRN1Q8IZH2 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC22.6■■□□□ 1.21
XRN1Q8IZH2 HNRNPA1P13-201ENST00000510646 963 ntBASIC22.6■■□□□ 1.21
XRN1Q8IZH2 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC22.6■■□□□ 1.21
XRN1Q8IZH2 AP000812.2-201ENST00000538934 718 ntBASIC22.6■■□□□ 1.21
XRN1Q8IZH2 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC22.6■■□□□ 1.21
XRN1Q8IZH2 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC22.6■■□□□ 1.21
XRN1Q8IZH2 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC22.6■■□□□ 1.21
XRN1Q8IZH2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
XRN1Q8IZH2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms