Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RNF43Q68DV7 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF43Q68DV7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF43Q68DV7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF43Q68DV7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF43Q68DV7 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
RNF43Q68DV7 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF43Q68DV7 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF43Q68DV7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF43Q68DV7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF43Q68DV7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF43Q68DV7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF43Q68DV7 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF43Q68DV7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RNF43Q68DV7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF43Q68DV7 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF43Q68DV7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF43Q68DV7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF43Q68DV7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF43Q68DV7 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF43Q68DV7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF43Q68DV7 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.47■□□□□ 0.39
RNF43Q68DV7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.47■□□□□ 0.39
RNF43Q68DV7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.47■□□□□ 0.39
RNF43Q68DV7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
RNF43Q68DV7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.47■□□□□ 0.39
RNF43Q68DV7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.47■□□□□ 0.39
RNF43Q68DV7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.47■□□□□ 0.39
RNF43Q68DV7 AC007064.4-201ENST00000637740 555 ntBASIC17.47■□□□□ 0.39
RNF43Q68DV7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF43Q68DV7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RNF43Q68DV7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.47■□□□□ 0.39
RNF43Q68DV7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RNF43Q68DV7 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF43Q68DV7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF43Q68DV7 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
RNF43Q68DV7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF43Q68DV7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF43Q68DV7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF43Q68DV7 AC025580.3-201ENST00000617932 1424 ntBASIC17.47■□□□□ 0.39
RNF43Q68DV7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RNF43Q68DV7 BCAR1-209ENST00000546196 1340 ntBASIC17.47■□□□□ 0.39
RNF43Q68DV7 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF43Q68DV7 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF43Q68DV7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
RNF43Q68DV7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF43Q68DV7 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF43Q68DV7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF43Q68DV7 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF43Q68DV7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RNF43Q68DV7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RNF43Q68DV7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF43Q68DV7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF43Q68DV7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF43Q68DV7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF43Q68DV7 AC092474.2-201ENST00000424288 719 ntBASIC17.46■□□□□ 0.39
RNF43Q68DV7 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.46■□□□□ 0.39
RNF43Q68DV7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF43Q68DV7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF43Q68DV7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.46■□□□□ 0.39
RNF43Q68DV7 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF43Q68DV7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.46■□□□□ 0.39
RNF43Q68DV7 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF43Q68DV7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF43Q68DV7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF43Q68DV7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.46■□□□□ 0.39
RNF43Q68DV7 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
RNF43Q68DV7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RNF43Q68DV7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.46■□□□□ 0.38
RNF43Q68DV7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RNF43Q68DV7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
RNF43Q68DV7 AC007950.2-201ENST00000615045 2347 ntBASIC17.46■□□□□ 0.38
RNF43Q68DV7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF43Q68DV7 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.45■□□□□ 0.38
RNF43Q68DV7 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF43Q68DV7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF43Q68DV7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF43Q68DV7 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF43Q68DV7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF43Q68DV7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF43Q68DV7 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF43Q68DV7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RNF43Q68DV7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF43Q68DV7 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF43Q68DV7 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF43Q68DV7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF43Q68DV7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RNF43Q68DV7 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF43Q68DV7 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF43Q68DV7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF43Q68DV7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF43Q68DV7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF43Q68DV7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.45■□□□□ 0.38
RNF43Q68DV7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF43Q68DV7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF43Q68DV7 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF43Q68DV7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.45■□□□□ 0.38
RNF43Q68DV7 AC093028.1-201ENST00000622998 982 ntBASIC17.45■□□□□ 0.38
RNF43Q68DV7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RNF43Q68DV7 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms