Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 GGT3P-204ENST00000453783 1664 ntBASIC15.54■□□□□ 0.08
RFX4Q33E94 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
RFX4Q33E94 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.54■□□□□ 0.08
RFX4Q33E94 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFX4Q33E94 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
RFX4Q33E94 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RFX4Q33E94 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFX4Q33E94 AC006449.6-201ENST00000612330 2296 ntBASIC15.54■□□□□ 0.08
RFX4Q33E94 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFX4Q33E94 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFX4Q33E94 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.54■□□□□ 0.08
RFX4Q33E94 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFX4Q33E94 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFX4Q33E94 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFX4Q33E94 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.54■□□□□ 0.08
RFX4Q33E94 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.54■□□□□ 0.08
RFX4Q33E94 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.54■□□□□ 0.08
RFX4Q33E94 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.54■□□□□ 0.08
RFX4Q33E94 CHCHD2P8-201ENST00000429873 447 ntBASIC15.54■□□□□ 0.08
RFX4Q33E94 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.54■□□□□ 0.08
RFX4Q33E94 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RFX4Q33E94 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.54■□□□□ 0.08
RFX4Q33E94 BX276092.5-203ENST00000456199 560 ntBASIC15.54■□□□□ 0.08
RFX4Q33E94 AC091607.1-201ENST00000490318 1060 ntBASIC15.54■□□□□ 0.08
RFX4Q33E94 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
RFX4Q33E94 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.54■□□□□ 0.08
RFX4Q33E94 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.54■□□□□ 0.08
RFX4Q33E94 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.54■□□□□ 0.08
RFX4Q33E94 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
RFX4Q33E94 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RFX4Q33E94 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.54■□□□□ 0.08
RFX4Q33E94 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFX4Q33E94 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RFX4Q33E94 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFX4Q33E94 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFX4Q33E94 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RFX4Q33E94 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFX4Q33E94 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.54■□□□□ 0.08
RFX4Q33E94 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFX4Q33E94 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.54■□□□□ 0.08
RFX4Q33E94 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.54■□□□□ 0.08
RFX4Q33E94 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.54■□□□□ 0.08
RFX4Q33E94 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.54■□□□□ 0.08
RFX4Q33E94 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.54■□□□□ 0.08
RFX4Q33E94 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.53■□□□□ 0.08
RFX4Q33E94 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.53■□□□□ 0.08
RFX4Q33E94 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.53■□□□□ 0.08
RFX4Q33E94 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFX4Q33E94 AP005117.1-202ENST00000581724 1908 ntBASIC15.53■□□□□ 0.08
RFX4Q33E94 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFX4Q33E94 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RFX4Q33E94 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFX4Q33E94 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.53■□□□□ 0.08
RFX4Q33E94 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFX4Q33E94 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
RFX4Q33E94 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFX4Q33E94 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFX4Q33E94 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFX4Q33E94 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFX4Q33E94 KLF4P1-201ENST00000412782 1185 ntBASIC15.53■□□□□ 0.08
RFX4Q33E94 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RFX4Q33E94 TMPOP1-202ENST00000424642 1267 ntBASIC15.53■□□□□ 0.08
RFX4Q33E94 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.53■□□□□ 0.08
RFX4Q33E94 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RFX4Q33E94 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RFX4Q33E94 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.53■□□□□ 0.08
RFX4Q33E94 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.53■□□□□ 0.08
RFX4Q33E94 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.53■□□□□ 0.08
RFX4Q33E94 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.53■□□□□ 0.08
RFX4Q33E94 AL121672.3-201ENST00000608644 468 ntBASIC15.53■□□□□ 0.08
RFX4Q33E94 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.53■□□□□ 0.08
RFX4Q33E94 AC073592.5-201ENST00000624854 528 ntBASIC15.53■□□□□ 0.08
RFX4Q33E94 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.53■□□□□ 0.08
RFX4Q33E94 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFX4Q33E94 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.53■□□□□ 0.08
RFX4Q33E94 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
RFX4Q33E94 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
RFX4Q33E94 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RFX4Q33E94 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
RFX4Q33E94 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFX4Q33E94 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RFX4Q33E94 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFX4Q33E94 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFX4Q33E94 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.53■□□□□ 0.08
RFX4Q33E94 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFX4Q33E94 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RFX4Q33E94 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RFX4Q33E94 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFX4Q33E94 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFX4Q33E94 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RFX4Q33E94 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFX4Q33E94 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFX4Q33E94 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RFX4Q33E94 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RFX4Q33E94 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFX4Q33E94 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
RFX4Q33E94 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
RFX4Q33E94 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.52■□□□□ 0.08
RFX4Q33E94 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFX4Q33E94 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms